Arabidopsis blast output of UN04698
BLASTX 7.6.2
Query= UN04698 /QuerySize=1701
(1700 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G43970.2 | Symbols: | La domain-containing pr... 319 5e-087
TAIR9_protein||AT2G43970.1 | Symbols: | La domain-containing pr... 311 9e-085
TAIR9_protein||AT5G46250.1 | Symbols: | RNA recognition motif (... 172 9e-043
TAIR9_protein||AT5G46250.2 | Symbols: | RNA recognition motif (... 170 3e-042
TAIR9_protein||AT5G46250.3 | Symbols: | RNA recognition motif (... 169 8e-042
TAIR9_protein||AT3G19090.1 | Symbols: | RNA-binding protein, pu... 157 2e-038
>TAIR9_protein||AT2G43970.2 | Symbols: | La domain-containing protein |
chr2:18205535-18208031 REVERSE
Length = 530
Score = 319 bits (816), Expect = 5e-087
Identities = 181/356 (50%), Positives = 222/356 (62%), Gaps = 30/356 (8%)
Frame = -3
Query: 1194 DESTQKIINQVEYYFSDINLATTDHLMRFISKDPEGYVPISVVVSFKKIKALVSGHAQLA 1015
++S QKI+NQVEYYFSD+NLATTDHLMRFI KDPEGYVPI VV SFKKIKA+++ ++QLA
Sbjct: 191 EDSIQKIVNQVEYYFSDLNLATTDHLMRFICKDPEGYVPIHVVASFKKIKAVINNNSQLA 250
Query: 1014 TILRNSGKLVVSEDGKKVKRQHPLTEADMEELQSRIIVAENLPEDHCHQNLMKIFSAVGS 835
+L+NS KL VSEDGKKV+R P+TE+ +EELQSRIIVAENLPEDHC+QNLMKIFS VGS
Sbjct: 251 AVLQNSAKLFVSEDGKKVRRISPITESAIEELQSRIIVAENLPEDHCYQNLMKIFSTVGS 310
Query: 834 VKTIRTCQPQASNGGATSASRGASKADAMHFSNKLHAFVEYETIELAEKAALELNKEGNW 655
VK IRTCQPQ + GA A+R A+K+D FSNK+ EL++ GNW
Sbjct: 311 VKNIRTCQPQNNGSGAPPAARSAAKSDGTLFSNKV----------------TELSEAGNW 354
Query: 654 RNSLKVRLLRRPSQAKPAQARGK-KAGQEDEAVHKEDDTSTSEQHSPNEKHLDDTHQQSE 478
R+ LKVRL+ + +P Q +G+ + G + + H+EDD +TSEQ P EK DD + +
Sbjct: 355 RSGLKVRLMLKHQTKEPKQGQGRGRKGHDADVEHEEDDATTSEQ-QPIEKQSDDCSGEWD 413
Query: 477 VQSHEHAQGEDHSXXXXXXXXXXXXXXXXXXXXXXPQY---XXXXXXXXXXXXXXXXRGA 307
E GED + RG
Sbjct: 414 THMQEQPIGEDQGNEKAAGQRKGRNRGRGKGRGRGQPHQNQNQNNNHSHNQNHNHNGRGN 473
Query: 306 H-------VVTPPSSNSVNN-EHPVIGK-QPPGPRMPDGTRGFSMGRGKPISVAIE 166
H V T PS+N +NN E P +GK QPPGPRMPDGTRGFSMGRGKP+ V E
Sbjct: 474 HHHHHHHQVGTQPSNNPMNNMEQPGMGKQQPPGPRMPDGTRGFSMGRGKPVMVQAE 529
>TAIR9_protein||AT2G43970.1 | Symbols: | La domain-containing protein |
chr2:18205535-18208031 REVERSE
Length = 546
Score = 311 bits (796), Expect = 9e-085
Identities = 156/251 (62%), Positives = 194/251 (77%), Gaps = 2/251 (0%)
Frame = -3
Query: 1194 DESTQKIINQVEYYFSDINLATTDHLMRFISKDPEGYVPISVVVSFKKIKALVSGHAQLA 1015
++S QKI+NQVEYYFSD+NLATTDHLMRFI KDPEGYVPI VV SFKKIKA+++ ++QLA
Sbjct: 191 EDSIQKIVNQVEYYFSDLNLATTDHLMRFICKDPEGYVPIHVVASFKKIKAVINNNSQLA 250
Query: 1014 TILRNSGKLVVSEDGKKVKRQHPLTEADMEELQSRIIVAENLPEDHCHQNLMKIFSAVGS 835
+L+NS KL VSEDGKKV+R P+TE+ +EELQSRIIVAENLPEDHC+QNLMKIFS VGS
Sbjct: 251 AVLQNSAKLFVSEDGKKVRRISPITESAIEELQSRIIVAENLPEDHCYQNLMKIFSTVGS 310
Query: 834 VKTIRTCQPQASNGGATSASRGASKADAMHFSNKLHAFVEYETIELAEKAALELNKEGNW 655
VK IRTCQPQ + GA A+R A+K+D FSNK+HAFVEYE +ELAE+A EL++ GNW
Sbjct: 311 VKNIRTCQPQNNGSGAPPAARSAAKSDGTLFSNKVHAFVEYEIVELAERAVTELSEAGNW 370
Query: 654 RNSLKVRLLRRPSQAKPAQARGK-KAGQEDEAVHKEDDTSTSEQHSPNEKHLDDTHQQSE 478
R+ LKVRL+ + +P Q +G+ + G + + H+EDD +TSEQ P EK DD + +
Sbjct: 371 RSGLKVRLMLKHQTKEPKQGQGRGRKGHDADVEHEEDDATTSEQ-QPIEKQSDDCSGEWD 429
Query: 477 VQSHEHAQGED 445
E GED
Sbjct: 430 THMQEQPIGED 440
Score = 67 bits (162), Expect = 3e-011
Identities = 34/48 (70%), Positives = 38/48 (79%), Gaps = 2/48 (4%)
Frame = -3
Query: 303 VVTPPSSNSVNN-EHPVIGK-QPPGPRMPDGTRGFSMGRGKPISVAIE 166
V T PS+N +NN E P +GK QPPGPRMPDGTRGFSMGRGKP+ V E
Sbjct: 498 VGTQPSNNPMNNMEQPGMGKQQPPGPRMPDGTRGFSMGRGKPVMVQAE 545
>TAIR9_protein||AT5G46250.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:18755388-18758056 FORWARD
Length = 423
Score = 172 bits (434), Expect = 9e-043
Identities = 99/258 (38%), Positives = 145/258 (56%), Gaps = 15/258 (5%)
Frame = -3
Query: 1215 EGGEVVKDESTQKIINQVEYYFSDINLATTDHLMRFISKDPEGYVPISVVVSFKKIKALV 1036
+G V DE QKII QVEYYFSD NL T L+ + ++ +G+VPIS + +F K+K L
Sbjct: 94 DGVVVPIDELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLT 153
Query: 1035 SGHAQLATILRNSGKLVVSEDGKKVKRQHPLTEADMEELQSRIIVAENLPEDHCHQNLMK 856
HA + + L+ S LVVS D KKVKR PL E + + + ++ ENLPEDH ++N+ +
Sbjct: 154 RDHALIVSALKESSFLVVSADEKKVKRLSPLPE--IRDPKIFTVLVENLPEDHSNENIRE 211
Query: 855 IFSAVGSVKTIRTCQPQASNGGATSASRGASKADAMHFSNKLHAFVEYETIELAEKAALE 676
IF GS+K++ C P A + +G K + + +LHAFVEYET+E AEKAA
Sbjct: 212 IFGKAGSIKSVSICDPNA----VEESEKGGKKENFIR--TRLHAFVEYETVEAAEKAAAT 265
Query: 675 LNKEGNWRNSLKVRLLRRP----SQAKPAQARGKKAGQEDEAVHKE---DDTSTSEQHSP 517
LN E +WRN L+V+LL + +Q +PA+ K VH + + + +H
Sbjct: 266 LNNEQDWRNGLRVKLLEQAAGKFAQRRPARREVDKEKDTTGRVHDQTGGEKNKKTREHQN 325
Query: 516 NEKHLDDTHQQSEVQSHE 463
+ H D + +H+
Sbjct: 326 HRLHHSDNPADDDGGNHQ 343
Score = 59 bits (140), Expect = 1e-008
Identities = 29/46 (63%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -3
Query: 288 SSNSVNNEHPV-IGKQPPGPRMPDGTRGFSMGRGKPISVAIETSLS 154
SS+S N HPV + K+PPGPRMPDGTRGF+MGRGK I T S
Sbjct: 374 SSSSHPNYHPVEVSKRPPGPRMPDGTRGFTMGRGKAIPPPTSTQTS 419
>TAIR9_protein||AT5G46250.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:18755388-18757723 FORWARD
Length = 341
Score = 170 bits (430), Expect = 3e-042
Identities = 96/241 (39%), Positives = 143/241 (59%), Gaps = 15/241 (6%)
Frame = -3
Query: 1215 EGGEVVKDESTQKIINQVEYYFSDINLATTDHLMRFISKDPEGYVPISVVVSFKKIKALV 1036
+G V DE QKII QVEYYFSD NL T L+ + ++ +G+VPIS + +F K+K L
Sbjct: 94 DGVVVPIDELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLT 153
Query: 1035 SGHAQLATILRNSGKLVVSEDGKKVKRQHPLTEADMEELQSRIIVAENLPEDHCHQNLMK 856
HA + + L+ S LVVS D KKVKR PL E + + + ++ ENLPEDH ++N+ +
Sbjct: 154 RDHALIVSALKESSFLVVSADEKKVKRLSPLPE--IRDPKIFTVLVENLPEDHSNENIRE 211
Query: 855 IFSAVGSVKTIRTCQPQASNGGATSASRGASKADAMHFSNKLHAFVEYETIELAEKAALE 676
IF GS+K++ C P A + +G K + + +LHAFVEYET+E AEKAA
Sbjct: 212 IFGKAGSIKSVSICDPNA----VEESEKGGKKENFIR--TRLHAFVEYETVEAAEKAAAT 265
Query: 675 LNKEGNWRNSLKVRLLRRP----SQAKPAQARGKKAGQEDEAVHKEDDTSTSEQHSPNEK 508
LN E +WRN L+V+LL + +Q +PA+ ++ +E + + D + E++ +
Sbjct: 266 LNNEQDWRNGLRVKLLEQAAGKFAQRRPAR---REVDKEKDTTGRVHDQTGGEKNKKTRE 322
Query: 507 H 505
H
Sbjct: 323 H 323
>TAIR9_protein||AT5G46250.3 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:18755388-18757723 FORWARD
Length = 341
Score = 169 bits (426), Expect = 8e-042
Identities = 95/241 (39%), Positives = 142/241 (58%), Gaps = 15/241 (6%)
Frame = -3
Query: 1215 EGGEVVKDESTQKIINQVEYYFSDINLATTDHLMRFISKDPEGYVPISVVVSFKKIKALV 1036
+G V DE QKII QVEYYFSD NL T L+ + ++ +G+VPIS + +F K+K L
Sbjct: 94 DGVVVPIDELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLT 153
Query: 1035 SGHAQLATILRNSGKLVVSEDGKKVKRQHPLTEADMEELQSRIIVAENLPEDHCHQNLMK 856
HA + + L+ S LVVS D KKVKR PL E + + + ++ ENLPEDH ++N+ +
Sbjct: 154 RDHALIVSALKESSFLVVSADEKKVKRLSPLPE--IRDPKIFTVLVENLPEDHSNENIRE 211
Query: 855 IFSAVGSVKTIRTCQPQASNGGATSASRGASKADAMHFSNKLHAFVEYETIELAEKAALE 676
IF GS+K++ C P A + +G K + + +LHAFVEYET+E AEKA
Sbjct: 212 IFGKAGSIKSVSICDPNA----VEESEKGGKKENFIR--TRLHAFVEYETVEAAEKAVTT 265
Query: 675 LNKEGNWRNSLKVRLLRRP----SQAKPAQARGKKAGQEDEAVHKEDDTSTSEQHSPNEK 508
LN E +WRN L+V+LL + +Q +PA+ ++ +E + + D + E++ +
Sbjct: 266 LNNEQDWRNGLRVKLLEQAAGKFAQRRPAR---REVDKEKDTTGRVHDQTGGEKNKKTRE 322
Query: 507 H 505
H
Sbjct: 323 H 323
>TAIR9_protein||AT3G19090.1 | Symbols: | RNA-binding protein, putative |
chr3:6601466-6603709 FORWARD
Length = 456
Score = 157 bits (396), Expect = 2e-038
Identities = 77/136 (56%), Positives = 97/136 (71%)
Frame = -3
Query: 1203 VVKDESTQKIINQVEYYFSDINLATTDHLMRFISKDPEGYVPISVVVSFKKIKALVSGHA 1024
++ D+ KI+ QVEY F+D++L + + + ISKDPEGYVP+S + S KKIKAL S H
Sbjct: 139 LLSDDLRLKIVKQVEYQFTDMSLLANESISKHISKDPEGYVPVSYIASTKKIKALTSNHH 198
Query: 1023 QLATILRNSGKLVVSEDGKKVKRQHPLTEADMEELQSRIIVAENLPEDHCHQNLMKIFSA 844
++ LR+S KLVVSEDGKKVKR T+ D EELQ R +VAENLP+DH +QNL KIF
Sbjct: 199 LVSLALRSSSKLVVSEDGKKVKRTSQFTDRDREELQGRTVVAENLPDDHSYQNLEKIFGV 258
Query: 843 VGSVKTIRTCQPQASN 796
VG+VK IR C P SN
Sbjct: 259 VGNVKAIRICHPPESN 274
Score = 51 bits (121), Expect = 2e-006
Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Frame = -3
Query: 741 SNKLHAFVEYETIELAEKAALELNKEGNWRNSLKVRLLRRPSQAKPAQARGKKAG--QED 568
SNK+HA +EY+ +A+KA +LN E NWR L+VRLL R S + R G +D
Sbjct: 285 SNKIHALIEYDNTVIADKAVEKLNDERNWRKGLRVRLLLRCSPKSVLKNRRNFDGILIDD 344
Query: 567 EAVHKEDDTSTSEQHSPNEKHLDDTHQQSEV 475
E E + H E LD+ + V
Sbjct: 345 ELPSYESGEDSPRLHL-TESQLDNDGDDNNV 374
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,200,536,474
Number of Sequences: 33410
Number of Extensions: 2200536474
Number of Successful Extensions: 101385846
Number of sequences better than 0.0: 0
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