SwissProt blast output of UN03653
BLASTX 7.6.2
Query= UN03653 /QuerySize=1199
(1198 letters)
Database: Uniprot/SwissProt;
537,505 sequences; 190,795,139 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q01085|TIAR_HUMAN Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 P... 168 8e-041
sp|P70318|TIAR_MOUSE Nucleolysin TIAR OS=Mus musculus GN=Tial1 P... 139 4e-032
sp|P32588|PUB1_YEAST Nuclear and cytoplasmic polyadenylated RNA-... 132 8e-030
sp|P31483|TIA1_HUMAN Nucleolysin TIA-1 isoform p40 OS=Homo sapie... 101 1e-020
sp|P52912|TIA1_MOUSE Nucleolysin TIA-1 OS=Mus musculus GN=Tia1 P... 101 1e-020
sp|Q6DRG1|RBM42_DANRE RNA-binding protein 42 OS=Danio rerio GN=r... 70 4e-011
sp|Q66KL9|RBM42_XENTR RNA-binding protein 42 OS=Xenopus tropical... 70 4e-011
sp|A2VDB3|RBM42_XENLA RNA-binding protein 42 OS=Xenopus laevis G... 68 1e-010
sp|Q0P5L0|RBM42_BOVIN RNA-binding protein 42 OS=Bos taurus GN=RB... 68 1e-010
sp|Q9BTD8|RBM42_HUMAN RNA-binding protein 42 OS=Homo sapiens GN=... 68 1e-010
sp|Q91V81|RBM42_MOUSE RNA-binding protein 42 OS=Mus musculus GN=... 68 1e-010
sp|Q6AXT7|RBM42_RAT RNA-binding protein 42 OS=Rattus norvegicus ... 68 1e-010
sp|Q14011|CIRBP_HUMAN Cold-inducible RNA-binding protein OS=Homo... 67 2e-010
sp|Q5RF83|CIRBP_PONAB Cold-inducible RNA-binding protein OS=Pong... 67 2e-010
sp|P60826|CIRBP_CRIGR Cold-inducible RNA-binding protein OS=Cric... 67 3e-010
sp|P60824|CIRBP_MOUSE Cold-inducible RNA-binding protein OS=Mus ... 67 3e-010
sp|P60825|CIRBP_RAT Cold-inducible RNA-binding protein OS=Rattus... 67 3e-010
sp|Q28IQ9|CIRBP_XENTR Cold-inducible RNA-binding protein OS=Xeno... 66 4e-010
sp|Q9SVM8|GRP2_ARATH Glycine-rich RNA-binding protein 2, mitocho... 65 7e-010
sp|Q9DED4|CIRBB_XENLA Cold-inducible RNA-binding protein B OS=Xe... 65 1e-009
>sp|Q01085|TIAR_HUMAN Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 PE=1 SV=1
Length = 375
Score = 168 bits (425), Expect = 8e-041
Identities = 85/188 (45%), Positives = 125/188 (66%), Gaps = 4/188 (2%)
Frame = -3
Query: 962 DSATCRSVYVGNIHPQVTEPLLQEIFSSTGALEGCKLIRKDKSS--YGFVDYFDRRFAAL 789
D R++YVGN+ VTE L+ ++FS G + CK+I + S+ Y FV++++ R AA
Sbjct: 4 DDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAA 63
Query: 788 AIVTLKGRHLFGQPIKVNWAYA-SSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYSTC 612
A+ + GR + G+ +KVNWA SSQ++DTS HF++FVGDLSPE+T + + F+ +
Sbjct: 64 ALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKI 123
Query: 611 SDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGTRQIRCNWAA-KGAASDDK 435
SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA K A
Sbjct: 124 SDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKST 183
Query: 434 PRSDTKSV 411
++TK +
Sbjct: 184 QENNTKQL 191
>sp|P70318|TIAR_MOUSE Nucleolysin TIAR OS=Mus musculus GN=Tial1 PE=2 SV=1
Length = 392
Score = 139 bits (350), Expect = 4e-032
Identities = 68/142 (47%), Positives = 98/142 (69%), Gaps = 2/142 (1%)
Frame = -3
Query: 830 YGFVDYFDRRFAALAIVTLKGRHLFGQPIKVNWAYA-SSQREDTSGHFNIFVGDLSPEVT 654
Y FV++++ R AA A+ + GR + G+ +KVNWA SSQ++DTS HF++FVGDLSPE+T
Sbjct: 67 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEIT 126
Query: 653 DATLFACFSVYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGTRQIR 474
+ + F+ + SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR
Sbjct: 127 TEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIR 186
Query: 473 CNWAA-KGAASDDKPRSDTKSV 411
NWA K A ++TK +
Sbjct: 187 TNWATRKPPAPKSTQETNTKQL 208
>sp|P32588|PUB1_YEAST Nuclear and cytoplasmic polyadenylated RNA-binding protein
PUB1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PUB1
PE=1 SV=4
Length = 453
Score = 132 bits (330), Expect = 8e-030
Identities = 69/182 (37%), Positives = 108/182 (59%), Gaps = 4/182 (2%)
Frame = -3
Query: 992 ILSGNLPPGFDSATCRSVYVGNIHPQVTEPLLQEIFSSTGALEGCKLI--RKDKS-SYGF 822
++ N G + R +YVGN+ +TE +L++ F G + K++ + +K+ +Y F
Sbjct: 60 VVPANAITGGRETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAF 119
Query: 821 VDYFDRRFAALAIVTLKGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDATL 642
V+Y A +A+ TL G+ + +K+NWA+ SQ+ + FN+FVGDL+ V D TL
Sbjct: 120 VEYHQSHDANIALQTLNGKQIENNIVKINWAF-QSQQSSSDDTFNLFVGDLNVNVDDETL 178
Query: 641 FACFSVYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGTRQIRCNWA 462
F + + VMWD +TG SRG+GFVSF +Q DAQ+A++ + G+ L R +R NWA
Sbjct: 179 RNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWA 238
Query: 461 AK 456
AK
Sbjct: 239 AK 240
>sp|P31483|TIA1_HUMAN Nucleolysin TIA-1 isoform p40 OS=Homo sapiens GN=TIA1 PE=1
SV=3
Length = 386
Score = 101 bits (251), Expect = 1e-020
Identities = 56/115 (48%), Positives = 76/115 (66%), Gaps = 5/115 (4%)
Frame = -3
Query: 722 SSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYSTCSDARVMWDQKTGRSRGFGFVSFR 543
S+QR + HF++FVGDLSPE+T + A F+ + SDARV+ D TG+S+G+GFVSF
Sbjct: 98 STQR--SQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFF 155
Query: 542 NQQDAQSAINDLNGKWLGTRQIRCNWAA-KGAASDDKPRSDTK--SVVELTNGTS 387
N+ DA++AI + G+WLG RQIR NWA K A S+TK S E+ N +S
Sbjct: 156 NKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSS 210
>sp|P52912|TIA1_MOUSE Nucleolysin TIA-1 OS=Mus musculus GN=Tia1 PE=1 SV=1
Length = 386
Score = 101 bits (250), Expect = 1e-020
Identities = 52/105 (49%), Positives = 71/105 (67%), Gaps = 3/105 (2%)
Frame = -3
Query: 722 SSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYSTCSDARVMWDQKTGRSRGFGFVSFR 543
S+QR + HF++FVGDLSPE+T + A F+ + SDARV+ D TG+S+G+GFVSF
Sbjct: 98 STQR--SQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFF 155
Query: 542 NQQDAQSAINDLNGKWLGTRQIRCNWAA-KGAASDDKPRSDTKSV 411
N+ DA++AI + G+WLG RQIR NWA K A S+TK +
Sbjct: 156 NKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQL 200
>sp|Q6DRG1|RBM42_DANRE RNA-binding protein 42 OS=Danio rerio GN=rbm42 PE=2 SV=2
Length = 402
Score = 70 bits (169), Expect = 4e-011
Identities = 36/94 (38%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
Frame = -3
Query: 740 VNWAYASSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYSTCSDARVMWDQKTGRSRGF 561
V+W S +T F IF GDL EV D L FS Y + A+V+ D++TG+++G+
Sbjct: 288 VSWEDTSLLEWETD-DFRIFCGDLGNEVNDDILARAFSRYPSFLKAKVVRDKRTGKTKGY 346
Query: 560 GFVSFRNQQDAQSAINDLNGKWLGTRQIRCNWAA 459
GFVSF++ D A+ ++NG+++G+R I+ +A
Sbjct: 347 GFVSFKDPNDYVRAMREMNGRYVGSRPIKLRKSA 380
>sp|Q66KL9|RBM42_XENTR RNA-binding protein 42 OS=Xenopus tropicalis GN=rbm42
PE=2 SV=1
Length = 392
Score = 70 bits (169), Expect = 4e-011
Identities = 33/76 (43%), Positives = 51/76 (67%)
Frame = -3
Query: 701 SGHFNIFVGDLSPEVTDATLFACFSVYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQS 522
S F IF GDL EV D L FS Y + A+V+ D++TG+++G+GFVSF++ D
Sbjct: 290 SDDFRIFCGDLGNEVNDDILARAFSRYPSFLRAKVIRDKRTGKTKGYGFVSFKDPNDYVR 349
Query: 521 AINDLNGKWLGTRQIR 474
A+ ++NGK++G+R I+
Sbjct: 350 AMREMNGKYVGSRPIK 365
>sp|A2VDB3|RBM42_XENLA RNA-binding protein 42 OS=Xenopus laevis GN=rbm42 PE=2
SV=1
Length = 392
Score = 68 bits (165), Expect = 1e-010
Identities = 32/73 (43%), Positives = 49/73 (67%)
Frame = -3
Query: 692 FNIFVGDLSPEVTDATLFACFSVYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIN 513
F IF GDL EV D L FS Y + A+V+ D++TG+++G+GFVSF++ D A
Sbjct: 293 FRIFCGDLGNEVNDDILARAFSRYPSFLRAKVIRDKRTGKTKGYGFVSFKDPNDYVRATR 352
Query: 512 DLNGKWLGTRQIR 474
++NGK++G+R I+
Sbjct: 353 EMNGKYVGSRPIK 365
>sp|Q0P5L0|RBM42_BOVIN RNA-binding protein 42 OS=Bos taurus GN=RBM42 PE=2 SV=1
Length = 448
Score = 68 bits (164), Expect = 1e-010
Identities = 31/73 (42%), Positives = 50/73 (68%)
Frame = -3
Query: 692 FNIFVGDLSPEVTDATLFACFSVYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIN 513
F IF GDL EV D L FS + + A+V+ D++TG+++G+GFVSF++ D A+
Sbjct: 349 FRIFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSDYVRAMR 408
Query: 512 DLNGKWLGTRQIR 474
++NGK++G+R I+
Sbjct: 409 EMNGKYVGSRPIK 421
>sp|Q9BTD8|RBM42_HUMAN RNA-binding protein 42 OS=Homo sapiens GN=RBM42 PE=1
SV=1
Length = 480
Score = 68 bits (164), Expect = 1e-010
Identities = 31/73 (42%), Positives = 50/73 (68%)
Frame = -3
Query: 692 FNIFVGDLSPEVTDATLFACFSVYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIN 513
F IF GDL EV D L FS + + A+V+ D++TG+++G+GFVSF++ D A+
Sbjct: 381 FRIFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSDYVRAMR 440
Query: 512 DLNGKWLGTRQIR 474
++NGK++G+R I+
Sbjct: 441 EMNGKYVGSRPIK 453
>sp|Q91V81|RBM42_MOUSE RNA-binding protein 42 OS=Mus musculus GN=Rbm42 PE=1
SV=1
Length = 474
Score = 68 bits (164), Expect = 1e-010
Identities = 31/73 (42%), Positives = 50/73 (68%)
Frame = -3
Query: 692 FNIFVGDLSPEVTDATLFACFSVYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIN 513
F IF GDL EV D L FS + + A+V+ D++TG+++G+GFVSF++ D A+
Sbjct: 375 FRIFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSDYVRAMR 434
Query: 512 DLNGKWLGTRQIR 474
++NGK++G+R I+
Sbjct: 435 EMNGKYVGSRPIK 447
>sp|Q6AXT7|RBM42_RAT RNA-binding protein 42 OS=Rattus norvegicus GN=Rbm42 PE=1
SV=1
Length = 474
Score = 68 bits (164), Expect = 1e-010
Identities = 31/73 (42%), Positives = 50/73 (68%)
Frame = -3
Query: 692 FNIFVGDLSPEVTDATLFACFSVYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIN 513
F IF GDL EV D L FS + + A+V+ D++TG+++G+GFVSF++ D A+
Sbjct: 375 FRIFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSDYVRAMR 434
Query: 512 DLNGKWLGTRQIR 474
++NGK++G+R I+
Sbjct: 435 EMNGKYVGSRPIK 447
>sp|Q14011|CIRBP_HUMAN Cold-inducible RNA-binding protein OS=Homo sapiens
GN=CIRBP PE=1 SV=1
Length = 172
Score = 67 bits (162), Expect = 2e-010
Identities = 38/86 (44%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
Frame = -3
Query: 686 IFVGDLSPEVTDATLFACFSVYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 507
+FVG LS + + +L FS Y S+ V+ D++T RSRGFGFV+F N DA+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 506 NGKWLGTRQIRCNWAAKGAASDDKPR 429
NGK + RQIR + A G +SD++ R
Sbjct: 68 NGKSVDGRQIRVDQA--GKSSDNRSR 91
>sp|Q5RF83|CIRBP_PONAB Cold-inducible RNA-binding protein OS=Pongo abelii
GN=CIRBP PE=2 SV=1
Length = 172
Score = 67 bits (162), Expect = 2e-010
Identities = 38/86 (44%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
Frame = -3
Query: 686 IFVGDLSPEVTDATLFACFSVYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 507
+FVG LS + + +L FS Y S+ V+ D++T RSRGFGFV+F N DA+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 506 NGKWLGTRQIRCNWAAKGAASDDKPR 429
NGK + RQIR + A G +SD++ R
Sbjct: 68 NGKSVDGRQIRVDQA--GKSSDNRSR 91
>sp|P60826|CIRBP_CRIGR Cold-inducible RNA-binding protein OS=Cricetulus griseus
GN=CIRBP PE=2 SV=1
Length = 172
Score = 67 bits (161), Expect = 3e-010
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Frame = -3
Query: 686 IFVGDLSPEVTDATLFACFSVYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 507
+FVG LS + + L FS Y S+ V+ D++T RSRGFGFV+F N DA+ A+ +
Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 506 NGKWLGTRQIRCNWAAKGAASDDKPR 429
NGK + RQIR + A G +SD++ R
Sbjct: 68 NGKSVDGRQIRVDQA--GKSSDNRSR 91
>sp|P60824|CIRBP_MOUSE Cold-inducible RNA-binding protein OS=Mus musculus
GN=Cirbp PE=1 SV=1
Length = 172
Score = 67 bits (161), Expect = 3e-010
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Frame = -3
Query: 686 IFVGDLSPEVTDATLFACFSVYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 507
+FVG LS + + L FS Y S+ V+ D++T RSRGFGFV+F N DA+ A+ +
Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 506 NGKWLGTRQIRCNWAAKGAASDDKPR 429
NGK + RQIR + A G +SD++ R
Sbjct: 68 NGKSVDGRQIRVDQA--GKSSDNRSR 91
>sp|P60825|CIRBP_RAT Cold-inducible RNA-binding protein OS=Rattus norvegicus
GN=Cirbp PE=2 SV=1
Length = 172
Score = 67 bits (161), Expect = 3e-010
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Frame = -3
Query: 686 IFVGDLSPEVTDATLFACFSVYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 507
+FVG LS + + L FS Y S+ V+ D++T RSRGFGFV+F N DA+ A+ +
Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 506 NGKWLGTRQIRCNWAAKGAASDDKPR 429
NGK + RQIR + A G +SD++ R
Sbjct: 68 NGKSVDGRQIRVDQA--GKSSDNRSR 91
>sp|Q28IQ9|CIRBP_XENTR Cold-inducible RNA-binding protein OS=Xenopus tropicalis
GN=cirbp PE=2 SV=1
Length = 166
Score = 66 bits (160), Expect = 4e-010
Identities = 34/79 (43%), Positives = 52/79 (65%)
Frame = -3
Query: 686 IFVGDLSPEVTDATLFACFSVYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 507
+FVG L+ E T+ +L FS Y ++ V+ D+++ RSRGFGFV+F N +DA+ A+ +
Sbjct: 8 LFVGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDAMMAM 67
Query: 506 NGKWLGTRQIRCNWAAKGA 450
NGK + RQIR + A K +
Sbjct: 68 NGKSVDGRQIRVDQAGKSS 86
>sp|Q9SVM8|GRP2_ARATH Glycine-rich RNA-binding protein 2, mitochondrial
OS=Arabidopsis thaliana GN=GRP2 PE=1 SV=1
Length = 158
Score = 65 bits (158), Expect = 7e-010
Identities = 33/73 (45%), Positives = 50/73 (68%)
Frame = -3
Query: 686 IFVGDLSPEVTDATLFACFSVYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 507
+F+G LS DA+L F+ + DA+V+ D++TGRSRGFGFV+F ++ A +AI+++
Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEM 96
Query: 506 NGKWLGTRQIRCN 468
+GK L R IR N
Sbjct: 97 DGKELNGRHIRVN 109
>sp|Q9DED4|CIRBB_XENLA Cold-inducible RNA-binding protein B OS=Xenopus laevis
GN=cirbp-b PE=1 SV=1
Length = 166
Score = 65 bits (156), Expect = 1e-009
Identities = 33/79 (41%), Positives = 50/79 (63%)
Frame = -3
Query: 686 IFVGDLSPEVTDATLFACFSVYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 507
+F+G L+ + + +L FS Y S+ V+ D++T RSRGFGFV+F N DA+ A+ +
Sbjct: 7 LFIGGLNFDTNEESLEQVFSKYGQISEVVVVKDRETKRSRGFGFVTFENPDDAKDAMMAM 66
Query: 506 NGKWLGTRQIRCNWAAKGA 450
NGK + RQIR + A K +
Sbjct: 67 NGKAVDGRQIRVDQAGKSS 85
Database: Uniprot/SwissProt
Posted date: Thu Sep 27 17:53:50 2012
Number of letters in database: 190,795,139
Number of sequences in database: 537,505
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,679,290,556
Number of Sequences: 537505
Number of Extensions: 9679290556
Number of Successful Extensions: 41003093
Number of sequences better than 0.0: 0
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