Simple sequence repeat (SSR)
| >UN28801 CCAGACAGCAAGATCTCAAGCACACATTCCTCTCCAGGGTTTACATCATTCTGGCAGCGCGCGCGCGCCTACACCCTACCGACAAACTATCAGT AACTTTTTTCATTGATGGCCTAGAGTGAGGGCTCTTCAGCAGGCATGAACATGCAATCTCGACTAGTAATTTAACTTGTTCTGTAATTTGTTCC ACAGGTGGAGGCAGGCGTTGATCCAGAATTTCAGTCAGAGATTTGAATTTCAGATCCTGGGAGGAAGTCAGGAAATCTCCTGGATGCGTTCCCA TTAAAATTTCTAGTGTAAGTACCCCAAAGCTGTAAACATCGCACTTTGTAGTCACTTCCATTGTGTATGCAAGTTCTGGAGCTACATAACCAAA CGTTCCTGCAAATAAAGTCCAGTTGGAAGAGTCTGGTTTCAGTAACCTGGCAGTGCCAAAATCTGATACGTGAGGAACCCAATCCGAGTCCAAT AAAACATTATTGCTTGACAAATCCCTGTGAATAATTGGTAGTGAACAATCATGGTGCATATAAGATAAGGCCTTTGCAATGCCTTCAACTGCCA TCACCCTCTTTTTCCAATCAAACACAACTGCTCGTTCCTCCTCATTCAGTACCATCTTTATGCTCCCTCCCGCTAAGAACTCATATACCAAAAA TGAGTGTCGTATATGTGAACAATATCCATAGAGCTTGACAATGTTTTGGTGACGTAATTCTGTCAATGCTCGGATCTCATTTTCAAAACTCTTC AAATTTTGCATCTCGCCATCTTCTGGTTCATGAATTTTTTTCACAGCAAAAACTTCGTTTCCCAATTCTGCTTTGTAGACGCTTCCGTATCCAC CAACCCCGACAATATGCTTAGAGTCAAAGTCCTCTAAGGCTTCAATGATCCTCTCATAGACCATTTTCCCATCATAGCTCCATATGGAAAACGG GCTTGCTTC |
Primers for UN28801 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | CACACATTCCTCTCCAGGGT | 59.962 | 20 | TGTTCATGCCTGCTGAAGAG | 60.136 | 20 | 125 | 21 | 145 |
| 2 | CAAGCACACATTCCTCTCCA | 59.831 | 20 | AAATTCTGGATCAACGCCTG | 60.074 | 20 | 203 | 17 | 219 |
| 3 | CACACATTCCTCTCCAGGGT | 59.962 | 20 | CCCTCACTCTAGGCCATCAA | 60.21 | 20 | 105 | 21 | 125 |