Simple sequence repeat (SSR)
>UN26540 TAAGCTTGCGATCAAAAAGATCATCATTGAACACCACAATCCCATGAACTATTTCACCATCTGCACCACTCCAACTTGTAACCTTTGGTGGTAT CAATTCATCCAGTTCTTTAAAATCTTCTTCATCGTCGTCTTCGTATTCTTCTTCGATTTCCATAACCTCTTCTTCTTCGTCAGATTGCAACACC ATAATTTCTTCTTCTTCTTCATACCCTTGTGTTTCCATAGATCTTTTGAGTAGTAGAATGATGGGGGTGCAACGCCGGTGAGTGTGTGTGTATG AGTTTATGAGAAGAAGGTTGGTGTTTGGACAAAAGTGAAAA |
Primers for UN26540 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CATTGAACACCACAATCCCA | 60.216 | 20 | TGCACCCCCATCATTCTACT | 60.34 | 20 | 235 | 25 | 259 |
2 | TCGTCAGATTGCAACACCAT | 60.12 | 20 | ATACACACACACTCACCGGC | 59.472 | 20 | 111 | 171 | 281 |
3 | TTTCACCATCTGCACCACTC | 59.682 | 20 | TGCACCCCCATCATTCTACT | 60.34 | 20 | 208 | 52 | 259 |