Simple sequence repeat (SSR)
>UN26227 CCTCACACCACTCCCACCGCCGCCGGAACACGACGGCTGAGGTTTCAATTGGTGCACTTCTTCTTCTTCTTCTTCTTCTAGTTCTTGTTGGTGT TCTAAATCAAGCTCCTTTTTGAAATTAAGTATGATTTTCTCCCAATTGGATTCCATATCTCCATCCCTGTCTTTTAGTTTGGAAATTAAACCGT CAATTACTGCTGGTGAAGGTGGCCAGAAGCTGACGTCATGTGAATTTGAATTTGAATTAGAATTAGTGCATTTTGAAAGATGGTTTGATTCGGA TTTTGGGTGTTTGGAAACTGGGATTGATTTATCGAGCATTGTTAATTATTGTGAAAAGTGTGTTTGAATTA |
Primers for UN26227 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GGCTGAGGTTTCAATTGGTG | 60.495 | 20 | ACACCCAAAATCCGAATCAA | 60.17 | 20 | 258 | 35 | 292 |
2 | GGCTGAGGTTTCAATTGGTG | 60.495 | 20 | AACACCCAAAATCCGAATCA | 60.17 | 20 | 259 | 35 | 293 |
3 | GGCTGAGGTTTCAATTGGTG | 60.495 | 20 | TGGAATCCAATTGGGAGAAA | 60.244 | 20 | 115 | 35 | 149 |