Simple sequence repeat (SSR)
>UN23819 CTTGCGTCTTCTTTAACATTTAAAATGCTGTAGTGAGTTTGACTGATTATATTGTTGGCTAATTGCATGGTAAATATACTTTAAAAGCTTCTTC CTTGATATTATTTATGATCGACGAGAAAAAAAAAATGAGTTAAGTTATGATGATGATGATGATGATGAATCCATTGCTTTGATTAAAATTTTGT ATTTTTTTGTTTAATTTATGGAGAGAGATATGATGTGGAGATA |
Primers for UN23819 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TTGTTGGCTAATTGCATGGT | 59.041 | 20 | TCTCCACATCATATCTCTCTCCA | 58.755 | 23 | 178 | 52 | 229 |
2 | ATTGTTGGCTAATTGCATGG | 58.508 | 20 | TCTCCACATCATATCTCTCTCCA | 58.755 | 23 | 179 | 51 | 229 |
3 | TTGTTGGCTAATTGCATGGT | 59.041 | 20 | ATCTCCACATCATATCTCTCTCCA | 59.084 | 24 | 179 | 52 | 230 |