Simple sequence repeat (SSR)
>UN23814 ATTTTTACTAACGAGTGTCATATACTTCCGATCGTGTATCAATTAATATGCAGAAATAACAAAAACCGATTACTAGCTATTAAATACTATGACT GCGTCTTTTCCTTGAAGAAGAAGAAGAAGAAACCCTAATGGTAAACAATCTAAAAAACTCATCTACCTCTTCACGTCTAGTTTTCTCAAAGAAT TCCACGTCGTCTAACAACCTTTTTCGTCTCTTGTGCAAGTGTCTACGTGGCGGTGGCAAAGGGAGTTGCGGGATCTTGTGATCATCGGATGTTG GAGTTTGACAGCCATAATCACCAACTTCTTCTAGCTTATCTTTGTTGTTTGACTCTAATGCTTCATCATCAACATGATCATCATGTTTCGCTAT GGATTTTGGGCTCGAGTAACTTTCATTAGACATTGCTGAGGTGATCAGCTGGAGAGAA |
Primers for UN23814 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TGCAGAAATAACAAAAACCGA | 58.342 | 21 | ATCACAAGATCCCGCAACTC | 60.081 | 20 | 222 | 49 | 270 |
2 | TGCAGAAATAACAAAAACCGA | 58.342 | 21 | GATCACAAGATCCCGCAACT | 60.081 | 20 | 223 | 49 | 271 |
3 | TGCAGAAATAACAAAAACCGA | 58.342 | 21 | TGTCAAACTCCAACATCCGA | 60.088 | 20 | 244 | 49 | 292 |