Simple sequence repeat (SSR)
>UN23011 AATTCACATGATATTGATATATTTTATTGATGCTTTGACATTCCAGGAACAAATTGACATCATTCTTGCTAATCTTCTGTATACAACTCATTCG TTTGATCACCATGATCATCGTCTTCAACAATTTCCACATCATCGTCCTTCGTAATAATCAATGATTTTTGCATCGTCATCATTATTTGTTGCAT CGTATCTATTCATCAAAAAACATCATCTTAGATCATCATCATCGTCCATTTATGCATCGATGGTTCATCATCATCATCATCGTCGTTGTCCGTT TAGGTATCCATGGTTCATCATTGTCATTGTTGTCGAGATTTCTCCATCAAAGACTATTATCATCATCTTTAACTTCTGAATCGCTATCGGTTCA TCGTCATCAACGAAGCATGAGTTCTTCTCTATCGGTTTGTGCTTCATCTCCACTGATCATATTTGTCGTGGACGATTATCATCATCAATCGATC ATCTTCGACACCTTCCTTTTAGAGCGAACCTATGCTCGAATTTTCTTCCAA |
Primers for UN23011 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CCACATCATCGTCCTTCGTA | 59.522 | 20 | CATGCTTCGTTGATGACGAT | 59.679 | 20 | 268 | 128 | 395 |
2 | CCACATCATCGTCCTTCGTA | 59.522 | 20 | CTCATGCTTCGTTGATGACG | 60.413 | 20 | 270 | 128 | 397 |
3 | CCACATCATCGTCCTTCGTA | 59.522 | 20 | TTCGTTGATGACGATGAACC | 59.502 | 20 | 263 | 128 | 390 |