Simple sequence repeat (SSR)
>UN22197 CCGAATTCCCGTTAGCCAAATGCCAAAGCGCCCTTGCAGCCATAGCCTTCATATAAGCTTTAGTAGCAGGATCCTCTAACTCTCTCCCCTTATG CAAACCATTAGCAGATAACGAAACACTCGGATGATGATGATGATGGTTCTGCTTCTTAACAACAACATTTTCACTTTTCTGATTCTGATTAGAA TTCGTAACGACCCCATTTGTTTGGTTTTTCATAGCCATAGTACTAGCAACAACACTATGCATCCTAAACGGCTGTTGACTGTTAGCCCCCGTCC CAGTAGGATGCCCAATTCTATTCTTATCATCCTCATCATTAACATTTGTACCCTTACTAGCCACATTACTACTTTTACTACCATTATTATTACT GCTATTATTATTATTACTAGCTAAAACAACAGCATGAAT |
Primers for UN22197 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CTCTCCCCTTATGCAAACCA | 60.066 | 20 | CAAATGGGGTCGTTACGAAT | 59.685 | 20 | 126 | 82 | 207 |
2 | CTCTCCCCTTATGCAAACCA | 60.066 | 20 | CCAAACAAATGGGGTCGTTA | 60.587 | 20 | 131 | 82 | 212 |
3 | CTTGCAGCCATAGCCTTCAT | 60.374 | 20 | CAAATGGGGTCGTTACGAAT | 59.685 | 20 | 175 | 33 | 207 |