Simple sequence repeat (SSR)
| >UN01231 CATTGTTCAAAAACCTAGTGTCACTCATCCCTTGCTTCTCATAGTTGTTGTACGTATTGGCATCATTTGTTTGCATGAACTCTTCTTGGTTTTG AGAGTTGTACATGTTGTTGTTGTTGTTGTTGTCACCCTTGTAGGCTTGTGGCTCATAGCTAAATTCATTAGGGATGTCTTGGGTACTACTATGA ATTGGTGTGGTGTATGCCACAGGGTTGTAGTTTTCGGGTAGGTTGGCGGGTAGGTAATTATTGTTATTATTGTTGTTTTCAAGGTTATTGTTGG TAGTGGTTGCGGACGGTGGAAGTTGGCCAGATTCGTGGCCAAACAATCCGTAACCACTACCTTCAGTAGTTTCTCGGGTTTGTGGGACAAATTT TAGGTCTTGCTCATTGGTGTTTTCGTTGGTGTTTTGATTAGTGTTCAAGGGTTGTGATTCTTGAGGGATGTTGTTAGAGACTTTAGCAAAGAAT TGGCTTTCTCTTGCATGGATGGTGGTGAGTGAGAGTGCTAGGGTTAGGAAAACAAAGAATGCAATGGAAGCCATTGGAGAGTGTTTTTTGGTCT TTGTGGTTCGAGTTTGTATGTATTCTTGGTTTATATAGCA |
Primers for UN01231 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | TTGGCATCATTTGTTTGCAT | 59.937 | 20 | GATTGTTTGGCCACGAATCT | 59.939 | 20 | 274 | 57 | 330 |
| 2 | TTGGCATCATTTGTTTGCAT | 59.937 | 20 | AATTACCTACCCGCCAACCT | 59.725 | 20 | 191 | 57 | 247 |
| 3 | GGCATCATTTGTTTGCATGA | 60.476 | 20 | GATTGTTTGGCCACGAATCT | 59.939 | 20 | 272 | 59 | 330 |