Simple sequence repeat (SSR)
>UN21132 ATATATAGCAATAATACCAGCCATGACAACGGGAATGATGGATTTCATAATAAGTTCTGGCCTCATTACTGACATGGCAGCAATACCTGTTCCA GATTTTGCCGTACCATATGCAGCGCCAAGAGCGCTGAAAATGATGGCCGATGCCGCGCCCATAACGCCGAAAAACGGCCCGTAAATCGGATTTG TCTCCGCCAAGCTGCTCATGGTTGTGCCGGGAACGTACTGCGACAAACGACGAAAGTCCAAACGATAGTTACACCGACGGTCGGAGACGTGTGT GCGGCGCGGCCGACTTGGTTCGGACTCGCGTGGAAAATAGATAAATCCAACCGGGCGAGAGCGGTGCACACGAGTTTCGATGTGTGTGTGTGTG TGTGAGTGTGTGTACGTGTAGAGTGAGTGAGCGAGTACGAACTACTACGAGAGCGGAATGAGCGAACGACGGCGGCTGCGATTAAACAGTGGCG AGAGACGCGTTCCGCGGATGGTGATAAAAAA |
Primers for UN21132 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GGACTCGCGTGGAAAATAGA | 60.214 | 20 | GCTCATTCCGCTCTCGTAGT | 59.603 | 20 | 136 | 304 | 439 |
2 | GGGAACGTACTGCGACAAAC | 60.559 | 20 | GCTCATTCCGCTCTCGTAGT | 59.603 | 20 | 223 | 217 | 439 |
3 | GTACTGCGACAAACGACGAA | 59.911 | 20 | TCTCGCCACTGTTTAATCGC | 61.304 | 20 | 251 | 223 | 473 |