Simple sequence repeat (SSR)
| >UN01190 TTATATTAATTAACTAATTATATCATTATTTCCAACAAACAAACGTACACACATTCAAGGGCTGGATGCCTTATTCAATACAAAGAAGATACAT ATTACATGAAACAAAAGGCGACACACACAAAAAGAAAAAAGAAGCACAAGATCAAAGCATACGTACAATAAGTTTTCCCATCTCTATCATCGAT GGATAGATGATAGACTCACACACACACACACATATATATAGTCTTCATTTAGTATCCCTCATATGGGACTACCTCTGCTTTATAACGAATGCTA TAGGAGTTGATGCCATTGAAAATGCCGTCATCCAATATAGTTTTAACCCATTCGCCTGTTGGAAGAAGATCACGCTGAACGTAAGAGAATGGAA CATCGCAAACACCTCTTGTAGCCAACATCGTCACCAGTATTGTCGCTTTTGGTGGAACCGTAACAGTGTAACTCGTATCTCTTTCCAGCTCATT TGTTACGGAGCCTCCCCACTCATGCGTATACCCAAATTCTGTTTTGAGCTCGACTTCCGACTTCGCAATAAATGGTACAATAGTGGTTTCGAAT GTCACCGTTACGCCAAAGCTTATTGACACGCTGTTATTCCAGCTAGTGGTCCTGGAATCTTTTGCGTGAAAATTGAGGGTCATTGTGTTGTCGG TTGTCAAGTTGTTGGTTCCATATGCTTGGTCGAGTTCTATGATTTGCTCATCATAAATTCTTGCGTCAGAGAGCCGGTATTCGAGTTCTGAGAT CTGTCTTTGAAGTACAACTTCGTCAACAATCAGCCTTGTCTGTCTTGACAAAGTAGGATATCTCGCGTTTAAGCAGTTGATGGATTGGTCCTCG GTGTATGCACCGCAGAAGCCATCGTTTCCCAAATTGCGAAGAGCAAGGACATTGTCTTTAATTTGGACAAAGGAAAATAAGGTCTTAATAGAGC CATCATCGAAACCACACATTATCTGGTTTTTATCATTTGAAGTATTTCTCCAGGAGCAGAAGTCGTTAAAGTCCTTTATACGATAGTTTCCATC AGCAGTGGTGACGAGCTCCTTGGCCACCCATTGATCTCCGATATCCAATCCGGACTGGAACTGCAGAAACGAGCTATTAAGTACGAGGGAGAGG TAATAGCCATTTAGGTCTTCAGACCTGAACGCGACATGAGAGGGTAGTACCAGCACACTATTATTATCCCTTAAAATAAAAGAGGATCCAATAG CGGATAGGAGTACGCCTTGATGGGTGTCATCATCAGGGCTTAACGAGTGGGTCATGGAGATCCCAGTCCCAACGTGGCGTAAGCGGACACTACT TTGATCATCATCATCATCTGCCAAGGAATGAGGCTCGAACAGGGTGCATGTGGCTTTTGATTTGTCTTCCTCGGGTTTCTTGGCGGATGCAACA ATCCAAGAATTCGACTCCATTACCAAATACTTATTATTGTACAACGACCTTATGTGAAACAGCCGGCCCTCTCCAGTTTTGGCTGGCTCCGCTG CGAACTTAGCTCGTGGACTCCATATTTGTTCTTGATCGAATTTCAAGAACCCTGATGGTAGGTTAGCTGGGATGTTCTCCGTTAGGCTCAAGTA TTTACCTCCAGATTGTAGCATGAAAAAACTTGGAAGTACCATGGCAGGTTTAATAGAGTGTGTATGTGCTTTCTTTTCTATATTGATTGATGGG TTTGATATGCTTATGATAAATACCA |
Primers for UN01190 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | GAGTACGCCTTGATGGGTGT | 59.997 | 20 | CCGGCTGTTTCACATAAGGT | 59.993 | 20 | 247 | 1230 | 1476 |
| 2 | AGTACGCCTTGATGGGTGTC | 59.997 | 20 | CCGGCTGTTTCACATAAGGT | 59.993 | 20 | 246 | 1231 | 1476 |
| 3 | AGTACGCCTTGATGGGTGTC | 59.997 | 20 | CCCGAGGAAGACAAATCAAA | 60.044 | 20 | 161 | 1231 | 1391 |