Simple sequence repeat (SSR)
>UN01190 TTATATTAATTAACTAATTATATCATTATTTCCAACAAACAAACGTACACACATTCAAGGGCTGGATGCCTTATTCAATACAAAGAAGATACAT ATTACATGAAACAAAAGGCGACACACACAAAAAGAAAAAAGAAGCACAAGATCAAAGCATACGTACAATAAGTTTTCCCATCTCTATCATCGAT GGATAGATGATAGACTCACACACACACACACATATATATAGTCTTCATTTAGTATCCCTCATATGGGACTACCTCTGCTTTATAACGAATGCTA TAGGAGTTGATGCCATTGAAAATGCCGTCATCCAATATAGTTTTAACCCATTCGCCTGTTGGAAGAAGATCACGCTGAACGTAAGAGAATGGAA CATCGCAAACACCTCTTGTAGCCAACATCGTCACCAGTATTGTCGCTTTTGGTGGAACCGTAACAGTGTAACTCGTATCTCTTTCCAGCTCATT TGTTACGGAGCCTCCCCACTCATGCGTATACCCAAATTCTGTTTTGAGCTCGACTTCCGACTTCGCAATAAATGGTACAATAGTGGTTTCGAAT GTCACCGTTACGCCAAAGCTTATTGACACGCTGTTATTCCAGCTAGTGGTCCTGGAATCTTTTGCGTGAAAATTGAGGGTCATTGTGTTGTCGG TTGTCAAGTTGTTGGTTCCATATGCTTGGTCGAGTTCTATGATTTGCTCATCATAAATTCTTGCGTCAGAGAGCCGGTATTCGAGTTCTGAGAT CTGTCTTTGAAGTACAACTTCGTCAACAATCAGCCTTGTCTGTCTTGACAAAGTAGGATATCTCGCGTTTAAGCAGTTGATGGATTGGTCCTCG GTGTATGCACCGCAGAAGCCATCGTTTCCCAAATTGCGAAGAGCAAGGACATTGTCTTTAATTTGGACAAAGGAAAATAAGGTCTTAATAGAGC CATCATCGAAACCACACATTATCTGGTTTTTATCATTTGAAGTATTTCTCCAGGAGCAGAAGTCGTTAAAGTCCTTTATACGATAGTTTCCATC AGCAGTGGTGACGAGCTCCTTGGCCACCCATTGATCTCCGATATCCAATCCGGACTGGAACTGCAGAAACGAGCTATTAAGTACGAGGGAGAGG TAATAGCCATTTAGGTCTTCAGACCTGAACGCGACATGAGAGGGTAGTACCAGCACACTATTATTATCCCTTAAAATAAAAGAGGATCCAATAG CGGATAGGAGTACGCCTTGATGGGTGTCATCATCAGGGCTTAACGAGTGGGTCATGGAGATCCCAGTCCCAACGTGGCGTAAGCGGACACTACT TTGATCATCATCATCATCTGCCAAGGAATGAGGCTCGAACAGGGTGCATGTGGCTTTTGATTTGTCTTCCTCGGGTTTCTTGGCGGATGCAACA ATCCAAGAATTCGACTCCATTACCAAATACTTATTATTGTACAACGACCTTATGTGAAACAGCCGGCCCTCTCCAGTTTTGGCTGGCTCCGCTG CGAACTTAGCTCGTGGACTCCATATTTGTTCTTGATCGAATTTCAAGAACCCTGATGGTAGGTTAGCTGGGATGTTCTCCGTTAGGCTCAAGTA TTTACCTCCAGATTGTAGCATGAAAAAACTTGGAAGTACCATGGCAGGTTTAATAGAGTGTGTATGTGCTTTCTTTTCTATATTGATTGATGGG TTTGATATGCTTATGATAAATACCA |
Primers for UN01190 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | ACAAAAGGCGACACACACAA | 60.199 | 20 | ATCTTCTTCCAACAGGCGAA | 59.813 | 20 | 248 | 105 | 352 |
2 | AACAAAAGGCGACACACACA | 60.199 | 20 | ATCTTCTTCCAACAGGCGAA | 59.813 | 20 | 249 | 104 | 352 |
3 | ACAAAAGGCGACACACACAA | 60.199 | 20 | TCTTCTTCCAACAGGCGAAT | 59.813 | 20 | 247 | 105 | 351 |