Simple sequence repeat (SSR)
>UN18362 ACAAAAGTAATTTGAACACCGGGCTCCACCTGAGCCATCCATTCTATGGGATCATCATCATCATCTAACACCAAATGACCAGACTGTCGAGGGG GTTCATACCCTCCATCTGTACTGTTAAAGTCCCAAGCAGGAGTTGAACTTGAGCCTCCAGGTTGCATATAAGGATGGCGTACACCTTTAGATAT GGTGTCAAAGTCTGTATAGGGTCGGTGTCCTTTCTTGAAGCTGCTTGGTCCTGTGGGGGGCTTCCCCTTTGAAGAACTAGAAACCTTTATTGCC ATATCTTTCATCTGGGATGTGAGGTTTTTGACGGCCTCTTTGTTCCCAACTTCTTCTCCATCATCTTCTACCTTTTGCTTTGAGCACGTTATAC ACGTCAGCATCTTTTTTCCACTCTTTGGCCAACCCACAAACTCTTCTTCTGTTTTGTTGAAATAAGTATTTCTTGTTTCTGCAAATCAACAAAA CAAGAGGGACATCTTCAATTTTTGACAAAACATTAAACTATGTCGGAAACTGCTAAAAACATCAAAACATGGTATGGTTATTTGGCTGAAAAAG TAGGAAACAAGGAAGGTAGTGTTGGTGGTGGTAACAGCATATATTCAAAATACGTGCGA |
Primers for UN18362 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | AAGTAATTTGAACACCGGGC | 58.952 | 20 | AGATGGAGGGTATGAACCCC | 60.015 | 20 | 107 | 5 | 111 |
2 | AAGTAATTTGAACACCGGGCT | 59.885 | 21 | AGATGGAGGGTATGAACCCC | 60.015 | 20 | 107 | 5 | 111 |
3 | AAGTAATTTGAACACCGGGC | 58.952 | 20 | TTCAAGAAAGGACACCGACC | 60.088 | 20 | 223 | 5 | 227 |