Simple sequence repeat (SSR)
| >UN01186 CCCATGATTCCAAAATTTACCCTTTTTCGCTCCTACAAATCGAGCAAACATTGCATATTTGCATGAGCCAGATTTTGCCAAAGGGTAAATATTT ACTTTTACCTTTTCCATCTCCCAACCAATACTTGTACAATACAAGCATCAATCAATCAACATCGAAAACGTACTATCACGTTTTCGCTGCTCAA AATTCCAGACAAAACCTTAAAAAACCGAACCAAACCAAACCATCCACCCATCAATCAATCAATCAATTAATCCGTTGGGAAAGACTTCTCCAAA ACCCCGTACCATAAAACTTCTCCCACATTTCATTTTCCAACTCAACAAACTCCTCATCCACATCCATTTTTTTAACCACAAAGCGTTCTTCTGC CATATCAGCGTCACAATCACTGCTCGCACTGCTAACCTCCCCACCACCCCTCCCTATAACCAACCCTTTTTTCATCATCCTTCTCCTTCTTTTC CTCCGTAACGCTTTCCTACACAAACCTGCTGGAACTTTATAAACAGCCAAAACAAGAAAATTCACCACCGTGCATGGGAAGCAACAAACGACGG CTGCACATTCAGCCGTCGTACCTCCAGCTACCTCAGCTATCCTGTGACGACTGCTACCACGTGATGAATATGAATAATCTTCTGGATGATGATC TAGTATTAGTTTACGTCGTTCTGTTGGTGATTGATGGAATATGATTTGTTTTTGTTTTGGCATTTAGGGTTAGGTTTTAGGGTTAGGGTTTCGT CGTGAAAAAAATATATGATGGTTCTAGTGAATTTATTACGACGAAACTTTTTTTGGGTTTGTTGTGGAATGATTTGTGATATATGTTTTTTTGA ATTTGATGGCCTCAATGTTCTGGAAGTTTTTATATAAAATTTGAATCAGCGAGTTTACCGGAATATGTTATGGTTTAAATATTTGAGAGAGAGA GAGATGTGGTAGAAATATAAATGAACTAGGAAAGTGTGTGTATGTGTTGAAATGGTTG |
Primers for UN01186 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | GGTTAGGGTTTCGTCGTGAA | 59.971 | 20 | CAACCATTTCAACACATACACACA | 60.606 | 24 | 260 | 739 | 998 |
| 2 | GAATCAGCGAGTTTACCGGA | 60.214 | 20 | CAACCATTTCAACACATACACACA | 60.606 | 24 | 110 | 889 | 998 |
| 3 | TTGATGGCCTCAATGTTCTG | 59.648 | 20 | CAACCATTTCAACACATACACACA | 60.606 | 24 | 150 | 849 | 998 |