Simple sequence repeat (SSR)
>UN16625 GTTGTTCGTGTAACAGGATTCATGTTCTTTGAAGGGCGTCATTTAAGGTAAGCGTGAAGTTTTTTTGAGGGCTCGTGATGATGATGATGATGAC CATGAACATGCTTATGATGTTCATGTCTTTGATGATTATGACCATGTTCAGGCACATGAGTTTCATTATCCCCAAGATCAGTTCCTAGTTCATT ATGACCATGTTGATGTTTGTGATTGTGACTGTGACCGTGACCATGACCATGACTGTGACTGTGTATCTGCGGACGTACAGGTGGCGGTGGTGGG TTCAAATGAACGGGTGCAAAAGGTGATGGAGGTGAAGGAGGAATTCGTGATGATGGAAGATATGCACAGGCTTGATTTGCAAGGGCTAACT |
Primers for UN16625 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TTGAAGGGCGTCATTTAAGG | 60.067 | 20 | GTTCATTTGAACCCACCACC | 60.073 | 20 | 265 | 29 | 293 |
2 | TTGAAGGGCGTCATTTAAGG | 60.067 | 20 | CACCTGTACGTCCGCAGATA | 59.74 | 20 | 243 | 29 | 271 |
3 | GGCGTCATTTAAGGTAAGCG | 59.742 | 20 | GTTCATTTGAACCCACCACC | 60.073 | 20 | 259 | 35 | 293 |