Simple sequence repeat (SSR)
>UN10200 CGGATCCGTGCTTGTTGATATTTTGCCCGGATCCGTGCTTGTTGGGCCCTCACGATTGACGCGTTCATCGGATCGAGCGTGCTTGTGTCCATAG ATAGCACCCGCATATCTTCGGCTATCCTTTCCCCAGCGACGATCTTGGTTGTGATTCGTTTTGTTGTTGTTGTTGCATTTTCCATTGAGAAAAC AAAGCGTATTCGTCGGGATTGACGTATGAGTTTTGTTGAGAAAACGAAGGAAAGTAGTGACTGTGGGTGTCCGG |
Primers for UN10200 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TGTTGATATTTTGCCCGGAT | 60.153 | 20 | CCGACGAATACGCTTTGTTT | 60.131 | 20 | 192 | 13 | 204 |
2 | GCTTGTTGATATTTTGCCCG | 60.456 | 20 | CCGACGAATACGCTTTGTTT | 60.131 | 20 | 195 | 10 | 204 |
3 | TCCATAGATAGCACCCGCAT | 60.457 | 20 | CCGACGAATACGCTTTGTTT | 60.131 | 20 | 117 | 88 | 204 |