Simple sequence repeat (SSR)
>UN09651 AAACAAGCCCATTAAACCATAGCTGTCCACGGACTCCTCCTCCGATTGCTCCTCCACCACCACCTCGGAAACCTCAAAATCATCCTCTCCGAAC TCAGGCTCATCCAATTGCTCCTCAAACTCAGTCTCATCCAATTGCTCTTCAAACTCAGGCTCGACGAAATTAGCCAATTCCGGGTGGTTGGCAG CAACATGGTCGTGGATCGTGTTTAGATCAACCTGTTCCTTACATACGATGCAAGTTATTATTTGTGGCAGCGAAACTATTTTCCGAAACATTTT TTATTACTGTGTGTTTTTGAGTGAGTGAGTGTGTGTGTGAGAGAGAGAGATGAGATGTGAGAGAGGAGAATAAGGGAGGGATGAAAGTTAGAGG TCCGGTGAGTGT |
Primers for UN09651 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GAAATTAGCCAATTCCGGGT | 60.15 | 20 | CGGACCTCTAACTTTCATCCC | 59.948 | 21 | 221 | 160 | 380 |
2 | GAAATTAGCCAATTCCGGGT | 60.15 | 20 | CCGGACCTCTAACTTTCATCC | 59.948 | 21 | 222 | 160 | 381 |
3 | GCTCTTCAAACTCAGGCTCG | 60.277 | 20 | CGGACCTCTAACTTTCATCCC | 59.948 | 21 | 243 | 138 | 380 |