Simple sequence repeat (SSR)
>UN09270 GTGAGACTCACGAGGTATTGACTTAGCTTTGCTTGAGGACGTGCTTTCTGGAAGATGAAACTCGAAAGGCGTTGCACTGTCATCTAGATGACCT GCTTCATGCATCATTTCCACATCTTTGTTGTCCACATTGGAGTATTGCTTCAGTTCTCTCTTTGTATGATAATCTGCATCAGCTTCAGACTCTG ATTCGATGGTGTTAAGTGCATCCATGTAAGAATCTGTTTCACTTTCAATCTCATCAGGCTGGCCCCTGACTATGACAGGAGATTGAATAGGTTC ATCATGAAACCCATTATCAATATGATCGACAACTCTGGACTTCAGATCTTCCTTCTCCTCAGTATCTATCTTCTCAGTTGTACAAGTTATATCT GTCGTGTCATTTGGCCGGCCTGTAGAATCTATGATTTCTAGCTTTTCATCCCAGGTAATGTAAGGTGACCTTGAGCTACTATGCTCTGCTAAAT AACTATCGTGGGCATTTTCATCTGGGACTCCACTATCTCCTTCAAGGGAAGCTGAATCAAGATAAGAATTATGCTGCAGATTTGAATCAGAAGA CGGTTCCTTAGCATTGTTGTCTTCAGATTGTGTTGAGTAGCTTGGACGGAATATACAGTCTATGTAATCCGACCCATTTCTTGAATCGAAAGAA GTCAGATGATCAACTTCAGGCTCGACCCCAGATTTTTGTGGAACATAGAATGTGGATACATCTTGAGAAGGGGATGCTTTCTCTTCAAAGATTG AAGAGCCATAATCCGTTCTTTCGGTTTGCATAACAACTGGGGCACCATGTGTGACATCTTTATACCTGGACGAAATTCTCTTTTTCTTGTTTCT ACGAGCCTTCTTTTCTCTCGGGGCACTTTGAAGATGTGCTTCATAACGGCCAGCTGAAGTTCTTTTAAAATAAGTTGGATCAGAGTATCTTTTG AAGCAAGATCCTGGGCCTCCAATGTCAAATTTGTCAAGTTTGTGCAGACGTGGAGGATCACGGCAGTCTTCATAGGGGTCCATTATGCATCGTG GCAAGTCGCTATATATGAAATGGTTTTGTTCAGTTCTGAGCCTAGTATGCCAGTGAGAACCAGCTGTGTAAGCGAAATGCAAGTGACTCCTTTG TGCCAAAATAGCCTTCTCTAATGGAGGGAGTGCAGCTTCAATGTTGTGTACTCGCTCTATCAATTTATGGCTTCTAGAAGATGTAATTAGCACT TGTTCTTGTAACCCATGAAATACTTCTGCTGCAAATTCAGCAAGATCGCCAAGCTGACGTAATAATCCGACGAGACCAGCGACAGCAACGCCGT CAAGCACCGCCTTCGGATCTTCTTCAACAGCTTGATTATTATTATAAAGCTCCGCCATTCCTAATCCGTACTCATTTCGTATCTCAACGCGCAC TAACGGCATCCTTCTTCTTCAACGCTTATTATTATTATTATTATTCAGTCTTGTTACTGGTAGTGCTAATAATAATGATATGAGTTAACTGTAC AGGGACTGCTTATTGGAGTATTTATTTATTTGACCAGTAGAGAGACGGACAGAGAGATTTTTTTATAAAAATTTGAGTAAATGATGAAAGAGAG AATAGAAGTGTGTGTGTGAAATGAGT |
Primers for UN09270 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TATCTCAACGCGCACTAACG | 60.037 | 20 | TGTCCGTCTCTCTACTGGTCAA | 59.907 | 22 | 160 | 1396 | 1555 |
2 | CGTATCTCAACGCGCACTAA | 60.037 | 20 | TGTCCGTCTCTCTACTGGTCAA | 59.907 | 22 | 162 | 1394 | 1555 |
3 | AAAGCTCCGCCATTCCTAAT | 60.061 | 20 | TGTCCGTCTCTCTACTGGTCAA | 59.907 | 22 | 194 | 1362 | 1555 |