Simple sequence repeat (SSR)
| >UN09096 TGGCTCGTCGGTTGTGGCTGCGATCTTTCTGGCTTTTTGCACGATCACGGTGTAGCCGGATTCATCCGAAGGCACGAACTCTGCTCCATATGTG ATTTCATAGCCTACTACTCTGGCTTCCCATACCAATGTGCAAGTCTCAGTAACAGGGAACTCGATGCAGTGCTTAGTTGCAGGCTTAATGGTGT CTTCAGTAACCGAATCAGTAGCACTAAACTCCTGTTCTCCCTCACGGCTAAGCCCGCCATATTGAACCGGAACCAACTCAGGTGCTATGTACTT GAACAAAGTCTCAGCAGTCTTTGATGGTCCAGCAAACACAAACTTGCTCTTGGTCCTTTGCGTAAAGAACGGGTTCACAATCTTGTAAAACGTC AAGTACAAAAACGGAACATTGATAAACACCTGCTTGGCGACAAATTCAGGGTAATAATCCTGAAACAACTGGAACGCCTGATTAGTAGCTTGTC TCAACTCCCACTTAAACGGTCCAGGCGAATTCTTAAAATCGACAACTTGCAGAATAGTACAAACACCATCAGGACTAAAATCCAACTTCCTAAT ACTTTTCTCCAAAAACTGAATCCTCCATCTCAAAAACTTGGTCCTCTTTTCCTCGGTCGAAAAAGTCTCGTTATACAATTCCTTATTCTGATAC TCCCCGTAAGCGTTGTAACAAACTGGATGACCTTCTTTATCTGTCCCATGCATGTAAACCACTTTCTCCTGTTCACATCCCAAGTCTTCAGTTA ACAAGGACTCGATGTCGAACGCTTTTCGCCACGCCACGACGCTTTTAAGCATTGCGAAAGCTTCCTTCACTTTGAAGTCACGGGCGCGGAGAAA CTTCAGCAAAACGACGTCGGATCGTTCGTCTGCTAGTAAGGGAATTCCCCATATTGATACCTCTTCTGGTGCCACTGGCTCAGCTGCTTCCACC TTCGCCGGAGATTCTTCCGCCGCCGGTGCCGAAGATTCTCCGGTCACCGGAATAATTTTTTCTTCAACCACCTCGATTTTCTTCTCTTCTTCAA CACATGTTTCGGTTTTCTCAACGACGGGTTCCGGTGCCGGATCCGTCAACGTCGCCGGAGTTTCGACGGTTTTCTCTTCTTCCTTACACTCAAC GGCAGGTGTTTCGGTGGTGGCCGGAGCTTCAACGGTTTTTTCCGATGACTCAGTTTCAGCCGGGCTTTTTTCTTCAACAACAGCCGGTTTTTCT TCCTCAACAGGTTTTTTTTCTTCTTCGGCCGGTTTCTTTTCTTCGACCGGTTTTTTCTCTTCAACCGGTTTAGTAAACTCATGTTTATTAAGAG CTTCTTGAACCAAGCACTTAAGTTCATCTAAAGCCTTCTTTTGAGGATCAGGTAATTCACCAGCAACATTACTTTCCTCCTTAAAAGAACCACT TTCACCTATCTTCTCTTCATCTTTTTCAACAACTGTCTCCGTAACGGTCTCAGTTGCCGTTACGGTTTCAGTTGGTGCAGCTTCGGTTTTCTCT GGCGCCGGAGCAGCGGCGACCTCAGTCGCCGCGACCGGAGCATCACTCGTCTTCACTGTCTCTTCAGCCATGAAAAGTTGGATTAAAAAAAGTT GGGAGAAATGAAGGCTTTTTTGAGTTTGTGTGTGTGTGTTTTTCTAGTGTGTGAGGGTTTGGAGTATGTGTTGGGGTTTGTGTTTAAGGGGGGG TTTTAAGGGCGGTTTTGGGGTTTGAA |
Primers for UN09096 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | CCGTTACGGTTTCAGTTGGT | 59.891 | 20 | CCCTTAAACACAAACCCCAA | 59.696 | 20 | 222 | 1467 | 1688 |
| 2 | ACGGTCTCAGTTGCCGTTAC | 60.179 | 20 | CCCTTAAACACAAACCCCAA | 59.696 | 20 | 235 | 1454 | 1688 |
| 3 | GTAACGGTCTCAGTTGCCGT | 60.179 | 20 | CCCTTAAACACAAACCCCAA | 59.696 | 20 | 238 | 1451 | 1688 |