Simple sequence repeat (SSR)
>UN09092 TTGCTGATATAATCCAAAGTACTGTATCCCTCGTCTTTCTTAGAGTATGTACATTCCATCCACTCGTCTGAGGTTACCATGGATTGGAGGTTGT GCTTTACACTTACCATCCGTTTCAGAGTTAAGAAATCAGTTGAGGCACGCGTGGGACCCACTACAACAATGTCGACTCCATAAGTGTACCTCCT CATCATATTCAAAACAACGCTGTGATTGTAAATAAATCTTGATATCGATCTCGCTTGTTCCAGTATTGTACTTATCAATTCAAGTTCTCTAAAA TCCTCCAATATCAAATCGACACATTCTGTTGCACACGGGGTCCAAAAAATAGTAGGGAAATTATCAGCAATTTGTTTCCCAACTTCAACATAAC GCGCTTCATTATTAGTAACGATTTGCAGCACATTTTTCACTCCAACTTCTTCAATAACCTCCTTAAACAAACTAAACAAACCTTGTGTCGAATC CAAAATATTAGTCCCATCAACGGACCTCAAAAACACCAGTCCTTGAGGACAATAAACTGAAAAATTCAAAAACATTTTACCATTTTCCGATCTA CATTCATCAACTAAAACAGAACAACCCGTCTTACCCAAACTCCCCATACATTGATCAACATCACTTCTCACTTCCTGAACCATATTCTTCAAAA CCCATCCTCTCATATCATGATACGCAGGCCCCACAACACCCGGCCCTTGTGCAGCAATTGCATCAATCATAGGCTGAAAATACGCAGAATTCAC AGCATCTAACGACACACCAACATCAAACAAAAACCGCCCAATCGCTAAACTAACTTGATGATTCACATTCACCCTTTCCGTACCATCATCATCA TCATCCGCAACAACTAACCCATCCGACCCTTTTCTCACTCTCCCCTCTTTCTTCCTTGTCTTATCATTACTCACCACACTCCCCTCTTCTCGGG TCAATAACAAACTACCACTCGGGTCAATACAATTAATATTATTCAAGTCAAATGAATCAGTTTCGTTAGCCAACTTTAGTTTCTTTTTACTCCT CTTAACAATGCCGTGGCCGTTTAAGCTGTGGTGCATTAACAACTTCACATCGGGGTGAACGCGTAAACAGGTGACGCCGTTACCTTTGTGACCA GCTAAATGTTCCTTAATCCTATGAATACCACCACCTTTAAACATTTTACCACAGTAAATACACTTGAGTTGAACCTTACCATCAATCCTACTTT TGTACATTTCACAATGTTTCCATGC |
Primers for UN09092 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | AACATCAAACAAAAACCGCC | 59.845 | 20 | AAAAGGGTCGGATGGGTTAG | 60.18 | 20 | 109 | 771 | 879 |
2 | CCCAAACTCCCCATACATTG | 60.044 | 20 | AAGGGTCGGATGGGTTAGTT | 59.691 | 20 | 280 | 598 | 877 |
3 | AACATCAAACAAAAACCGCC | 59.845 | 20 | AAGGGTCGGATGGGTTAGTT | 59.691 | 20 | 107 | 771 | 877 |