Simple sequence repeat (SSR)
| >UN08876 TTTTGAACAAACAAAAATGTATTCTTCATAGAGGATGGTTTGAGATTCTTCATTACATTGTTTTGACAGAAATTAACAGATACAATGTTACAGT TCACTTATTGTCTATGTATCACTACTTTCTTTTCGTAGTCTTTGTAGAATAAGAGAAAACGAGAACTTTTGGGTTTTATCAGCAGCGTAAACCA ACCGTATACTAATCTGATTTCTTCAATAAACTCAGCAGAACTCCGGCACTTAGAGTAGTTGCCACACAGCCGAGTGAAACTTCAGTCGATACAT GGTACCCGAAGAATTCTAGAATCATCTTGCCTCCAATGAAACCGAGAACTATGCCAATGGAGGGCTGTAGATACTCCAACTCTGACATGCTTTC TGAAATAAGTGTATATAGAGACCTTAAACCTAAAATCGCAAAGAAATTAGATGAAAACACAATGAAGGGGTCTCTTGTCACACCAAAAACTGCT GGTATAGAGTCAACAGCGAATGCAATATCACTGAGTTCAATAACTGCTACAGTCAGAAGCAAAGGTGTTGCTTTCCAAGCTCCATTTACAACTG TAAAAAACCTATCGCCATCATATGCAGATGTTACTGGAATGATCTTTTGGCACGTCTTCACGATAAAGTTTTCTGATAGGTCTTCTTCGTCGTC ATCACCAGCAAAAAATAACTTGAAGGATGAGTATAGAAGTATTGATGCCAGCAGCAAGTTCACCGCCTCAAACCTCTGAAGGGTTGCAGATCCA AGAAGAATCAATGACAAGCGGAAGATTACTGCACCAGCGATGCCGTATGAAAGCACCCGATTCTGATAAGCAAGTGGCACCTTGAAGTATTTGA ATATCAAAACAAAGACGAAAAGATTATCTACCGACAAGCTTTGTTCAAGCAAGTACCCAGCAAAAAATTCTGATGCCTTGCCGATTCCTTCTTT CAATCCGATACCAACACCAAATGCCACAGCTGAGAACACGCACAAGGCTACAGTTTTAGCAGATGTCTTGTAATTTGCAAGATCTTTAATCTTT TCTTCTACATCGTTTTTAATTGTGAGACGGCTTTTGGATTTGGCATTTTCATTGTAAGAACTCGAAGAGGAAGTTTCTCCCTCTGAAGAAACAG ATTCTTGATCTTCTTGTTCTTGTTTGACCCCTTTTGAACAAACAACTGGTAACTTCCTTTGCAGCCTATTCCTACAAACACCTGAAAGATTGGT TGAATTAGTGAATTTAAAATGAACCCATTTGGGAATTTGATGAGAAAATGTTATTGAAGTGAGTTTAAGTGAAGTTGTATCAGATTGAAGTGGT GGGTGCATCCCATTTTGTATTATTGAAGCTAATTTCATGGTTTGATTATTTAGTTATTTAGAGTGTGTGTGTGTGTGATGCACAGGTTTTTGAG TTCAGATGATGAAATGAAACTGTAGTTTGTGTTGTGGTGTATGATGGATCCATGAAA |
Primers for UN08876 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | GGGTGCATCCCATTTTGTAT | 59.51 | 20 | TGGATCCATCATACACCACAA | 59.639 | 21 | 146 | 1317 | 1462 |
| 2 | TGAACCCATTTGGGAATTTG | 60.535 | 20 | TGGATCCATCATACACCACAA | 59.639 | 21 | 221 | 1242 | 1462 |
| 3 | AAAATGAACCCATTTGGGAA | 59.111 | 20 | TGGATCCATCATACACCACAA | 59.639 | 21 | 225 | 1238 | 1462 |