Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN08758
CACCATGGTGCATGTGCATCCCTGATTGCATCGGAAAACTGTTCTGTTTAAGCAAATTCGGCAAACTCTGAGGACGCGAAACATCATCAGGTCT
CCAAGCCCTTAAACCACCCGACGCCCGGTTACCCTCTTGACCCGCCCTAGTAGTCAACTCAGGCTCCGGCTCCGGAACAGTTTCACGCACAACA
GACTCCGTATCACAATTCTTCTGAAGTTCATCATCCGCTATCAACGCATCCGCCATAGTTTCCCAATCATCCAAACAATCATCATCATCATCAT
CATC
GCCAACCTCATGATCACGACGATCTTCTTCATCCGTCAAATTCCCTGAGAAACACCCCCCACTACTACCACTACTACTACCACTGCTACT
CCCACACCCACTACTACTCCCGGTAAAATTCGCAACCGAGACACTACTAGTATGACTGGTAGGACTATTCGACAACGACTCACTATCACTATAC
CCACCCTCATTCTCTCCAACACTAATCTCCAACTTCACCATCTCACACTCCCTTTCCTTCACCGCATGCACATCCGGAACACGCATTTTCACCT
CTTCCTTCGCCCTGGTCCCCAACCCCTTGTTCTTCACTTGTGATAACCACTGTTCACGACGAACATCAAGTTTACTCTGCTTCAATTTAGCACT
ACGATTCACTCGTTTTTTCTTTCCGAAATCCTTGGAATTAGAAGCAGCAGTAGGGATCGAACCATTAGCAATCGAATCATAAACCATGGTTGAT
AATGAAATTGACGTAACGAATTGAGAAAATATCTAGAGGATTAATTGGGGGAAATTGGGATTGATTATGTGGTGTTGAAAGTGTGTGTGTGTTT
GGATGGATGGATGGATGGATAGATGATAACGGCTCTCTCTGTGTTTGTTTGTTTGGTTGTTT

Primers for UN08758 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1GGTCTCCAAGCCCTTAAACC 59.9420TTTCTCAGGGAATTTGACGG 60.04420249 90338
2TTTCACGCACAACAGACTCC 59.8820GTGGGTGTGGGAGTAGCAGT 60.03320213 175387
3TTTCACGCACAACAGACTCC 59.8820TTTCTCAGGGAATTTGACGG 60.04420164 175338