Simple sequence repeat (SSR)
>UN08590 TCGGCTTCGGCCGGCGGTCCGGAAGTCACTCTTCTATGTAATACTCTTTTATGTTAATTTTGCTCTTTTGGTTCCTTCAATAAGGTCCTCACCA CCCACCAAATCAGCTCCTGCAGCTCTAGCCTCATCTGCAGCTGGTCCTTCAGCAAACACAGCCACCCTAAGAGCCTTTCCACTGCCATGTGGAA GAGATAATGAGCCAGCTAATTTCAGATCAGTACGGCGCAGATCAACAGCCATTTTTACATGTGCTTCCAATGTCTCATCAAAATTACACTTGGC ATTTGCCTTAACAAGGTGAACAGCCTCCTTAAGATCAAGAGCAACTTTCTTCCCATCACCCTTGTCCTCTGTTTTCTCAACCTTAACCAAAACC GGAAAGGGAACCTTTTGCTCCTCTTCTTGACCCCGAAACACCCGTCTCATAACCCGATTCTCGGCTTCAATCTTTCTCCTCTCAGCCTCCAAAT CCACACCCTCACCCTCAACCTCACCCACCCTATCCTCAGGCAAAGGTGCCACCTTTTGCGCATAAGAAACCGGGTTATTAAAGTCTCTGACGAA CCTGACATCTTCACGGCTCAATGGTGTTGTGGGTTGTTGAATTGGGTCGGGTTGTTTTTCGGGTTCTTTAGGTTTGACAGCGTATGAAACGGGT TGGATTGGTGTGGGTTCGGGTCTTTGGGTTTGAATGGTTTCATTGGGATCTGGTAGTGATGATGATGATGAACAGAGTGATCTGTGGAGTGATT GGAATGGTGAACTTGGTGATGATCGGATGACGTGGCGGCGAGCTTGAGAAATGAGGCGAGTTAAGGCCGCCATTAATGAAGTTGGTTTTGAGAA ATGAGGGTTTTAGTACTGAGGTTGAAGATGACTAGT |
Primers for UN08590 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CTGACATCTTCACGGCTCAA | 59.984 | 20 | TCCGATCATCACCAAGTTCA | 60.048 | 20 | 214 | 566 | 779 |
2 | CTGACATCTTCACGGCTCAA | 59.984 | 20 | TCACCAAGTTCACCATTCCA | 59.935 | 20 | 206 | 566 | 771 |
3 | CTGACATCTTCACGGCTCAA | 59.984 | 20 | TCACCATTCCAATCACTCCA | 59.893 | 20 | 197 | 566 | 762 |