Simple sequence repeat (SSR)
| >UN00858 TTAATGCAGTTATACATATGAACTTAATCATCAATCGGAACCAGCTCAATCTTGATCTCAGAAATGGTCACCTCATCAGCCCCTCCTCTGGGCA CCAAACTCACCAAAACATAGTCTTCATCTTCAGCATCAACATCCTCCAACAGCTGTGTGATTCCATACCCGGCCCCACTTGTTGTGAACATATT CCCACCATACTGGTGTGCCATTTCCGTGTAAGAACCAGCAAACTCGCTATCAGCTGCAGTGGTCTCAATTTCATCGTCAACGGCATTCACCAAC ACATCAAATGTTAAATATACGCTACCGTCGAATTTGATTCCGTTCAAGAACAACACCTCTTTTGCATTTTGCTTGTCCTTATTGCTTCTCTTTT TGACAGGCCTCTTTACGTATACCTTAATTACCGTGTCTAGCTTCACCGGGAATACCATGTCTTCCACTCTCTTCACATAATCTAATTTCTTCTT CTTTTTATGACGTGGAACTGACCTATAATTTTCCCATGGGTTTGGGGACTTTTCGAACTCATATCCCATCCGTATTGTGTCTAAACAATCTTTG TTGCGGACACGTACAAGCTTCCTGTTCTCATCATAAAACACATATGATGCATGGTTCCAGTCATCGGACTTTGGCTCTTGGTGTTTCGGGTCCA AATCTTTCCAGATTGTCCACATCCGATCAATGTTGGCATGATGGGCGTAAAATATTGGGTCATACCCAGCTGAGTAGACGCCTCCCATGTCCTC GTTCATCGGCAACCTAGGGTTACCAGTCCAATCATGAACCGCATTGTGAATTGAATTCTCTATGCATCCAGCACTTAGCTGATGATGATGATGA TTAGTAGAAGTCCCATCTGGTTGGATAGCGGGGTAGGGGTTGGGGGGCGAGGGGTCAACACCAAAGAAGCTTTTAGCAGAGTATGCATTGTCAA TCATCTGTCTTCGCATAATACACAGATTTTGTTGTACCAGCATTGCAGGGTAATCGTTTTTTCCTTCATAACAGTTGAGATCTATGGCAGTCGG GGGGAGGTGTTCGCCATTCCGGTGAGGGTCAAATAGAGGGTTGTTTCTAGCATTACCTCTCCCTTGGGCTTCATACATAGCAGGAATTACCATT CCAGTTGGATGGTCCCAGTTCCAGTATGGTAAAGCGAATGTTTCGTCACCAATTAACTTTCCTAATATCCTCTCATGGAAATAGAGATACCAAC GGTGGAATGGAAAGAAAAGCGAGGATTTGCGAACGTCGATTCTATAGGTAGAACGTATATTGTTTCCTTGTATGTATGCCTTGCAACAATACGC ACAATGGATCTTAGCTTGTTGGTTCCAACTGAGTGGATCGTCATCTTCGAGATCCTTCATTATTTTAACTGCCAATTTATACTTATTGATATAC TCTGGAGTGACTCTCTGTGCCGCGGGTCGGACACGTGTATTTTGGAAGGCGGGCAACTTGTAACTTTCCGGTCGAACGTATGGATCTAGTGGTT TAGGGCAACAATTACCGCCCCTCAAAGAGTTTGTAGGGACATTCACGTCATAGCAGTTTCGGATATCTTCAGGAGCTGTCACCTCGTATGTTTT GTGATCATCATCTCCCGCACCATTGCATGAGACTTTGAAGCGACGTGGTGATGGTTTAGAAAACAATGGAGAACGAGAACAAGTATTTGGCTTT TTAGTAGTAGCAGTGATGGGAAGAGTGGATAAGCTCAAAGAAGCCATCATGTTTGGCTATTGGTGGTGCTTCTAA |
Primers for UN00858 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | ATCATGAACCGCATTGTGAA | 59.931 | 20 | TTCTTTGGTGTTGACCCCTC | 59.943 | 20 | 132 | 783 | 914 |
| 2 | TCATGAACCGCATTGTGAAT | 59.931 | 20 | TTCTTTGGTGTTGACCCCTC | 59.943 | 20 | 131 | 784 | 914 |
| 3 | AATCATGAACCGCATTGTGA | 59.931 | 20 | TTCTTTGGTGTTGACCCCTC | 59.943 | 20 | 133 | 782 | 914 |