Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN08143
TTTTTTTTAAACAATGAATTGAGATTCCATTTCCTCCAACAATTAACATAACCAAACCTACAATCATTTTGATCTCACTTATAAAACTTTTGTG
TTAACGAAGGCCACACACACATACATGTATGTCTAATCTTACAACACGCACTAAGATCCCACGATAATACCCTCTAAAACAAATTTTATCATCA
GTATCTTTCATTCAGTAACACTCATTTGCTAAATCTAACGGTAGTTACGGTATTTGGGGCTGTACATGCAGCTTTCAGCATATGCTACAAGGTT
TTCTGGTTGCGGAAGACGACTTGCCAAACCAAGTTCATATACTTTAGCGGCAACCTTGGCAGCAATATGAGCAGAAATTTTGCGAATGTTGGTG
AACGGTGGGTATATGAGCCCATTGTCAAAATGCTCCTGTGTTACCTGTTCAGCCAGAGCCTCGGAGGCTGCTAAAAGCATGTCATCATGAACAC
GGATTGCACCAGAAATAATCAATCCCAAACCGAATCCAGGGAAGATGTATGCATTGTTGGACTGGCCTGATACGTAGACCTTTCCGTTATATTC
AACAGGGGCAAATGGACTTCCACTGGCAAAGATAGCACGGCCCTCACTCCAGGTATAAGCTTGCTCAGCAGTACATTCGGATTGTGAAGTTGGG
TTGGAAAGAGCGAGAATAATAGGTTTCTCATTAAAAGACGCCATAGCTTCAACGACATCTTTAGTAAAGGTCTGTCCAGCTCCTGATGATCCAA
TCAACACCGTCGGCCTGATTGACTTGACAGCATCCAGGAATTTGTTAACAGGCTCATGATCATGGGCCCATGGCTTCTTGAAATGCTGAAGTGA
ATTAAGGCGGGATTTAACGATCAAACCCTTCGAGTCCACAAGCCAAACCTTCTTGCGGGTCTCATCTAATGGTGCACCTGTCTGTTTTGATATC
TCGAGAGCTATGAGTTCAGCAATGCCTGTGCCAGCCTCTCCAGCTCCAAGGAATAGGAATTTATGGTCTGCCAAGGATCCACCAACTAATTTTA
GTGCCGAAATAAGCCCAGCAAGCACCACTGATGCAGTCCCCTGGATATCATCGTTAAAAACAAGATGGGTGGTGCTATACTTTTCAAGAAGATC
GAATGCATTGTGGTTAGCAAAATCTTCAAACTGAATTAGGACCTTTTCCCCATAATTCTGCTTGACAGCAGACATGAACTCACTCATAAGTTCA
GCATACTCCTGCCCACTCGCCCTCCTTTGCCTTAGACCAATGTAAAATTCATCATTCAACATTTCCTCATTGTTAGTCCCAACATCAATGGTTA
CCGGCAAGCAAGCTGAAGGACGAATTCCTCCAAGAGCTGTGTAGAGAGAGAGCTTTCCCACAGGTATGCCCATTCCCTGGCAGCCAAGGTCTCC
TAGGCCTAAAATTCGCTCACCATCAGTGACAACTATGACTTGAATTTTCTTCTGAGGCCAATTCTTTAAGATCTCAAGGATCTTCCCCTTGTCT
TTCAAACTAATAAAGAGTCCCTGTGGGGTTTTGAAGATGCTCCCATATTTTTGGCAAGCTTCACCAACGGTTGGAGTATATACGATTGGGAGTA
GCTCCTCAACGTTTTCAATTAGTAACTTGTAAAAAAGTCTCTCATTTCTCTCCTGAAGATCCATCATGGCCTGATATCGCTGAAGAGGTACTTG
ATATTGGCGGATATTGTGCATCATCTTTTTTACCTGAAGATCGTGATTGACAACAACCGGAGGAAGAAGGCCACGTAAATAATGGGCATCTCGT
TCTTTCTCAGTAAAGGCCAGACCCTTGTTGTGATGTGGGTCACGCAACAACGAATAGCCACTAGCAACAGAAACCGACCAAGGCGTAATGAAAT
GATCCTCGGTAGCACTATCTTCACCATACACATCTTCAACGCCGCCACCAACAGCCGTCGTTTGCTTCTTATCATCCGCCTCGTTACTTCCAAC
TTCTACGGCGACAGGAGCGTTTACGTCCTTAACAGCACTGTCCATTGAAACGCTCATGTTTCGCTGCTCGGGTTTGCCGTTACCGTTCACCATA
GCTACCACTGTTGGCCGTTTAGCGGATGATAGGAGTCTCAGCGACTGCGATTGCGTCATCGAAACACCAGAAATCGAATTTTTCACGAACGAAG
AGGTGTTTAACGACATCATGATGACGGCGTCAAAGAAAGAGAGAGAGAGAGAGAGAGAGAGGGTTTGACCTGTGTAGATGCTTCTTCTT

Primers for UN08143 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1CCGTTTAGCGGATGATAGGA 60.05320AAGAAGAAGCATCTACACAGGTCA 59.47724169 20832251
2ATAGCTACCACTGTTGGCCG 60.15420AAGAAGAAGCATCTACACAGGTCA 59.47724186 20662251
3CAGCACTGTCCATTGAAACG 60.30120AAGAAGAAGCATCTACACAGGTCA 59.47724245 20072251