Simple sequence repeat (SSR)
| >UN08080 TTTTCCTCTTTCTGTTGTTCACAGCTCCTTGTGGCTTCTTATTCTGTTTTAAATTCACTGGGTTTTCATATACTGGTCTTTTGGTGAAAACAGG TTGTGTGAGATTAACAGGAATGCTAGTCTGTTGGTGAGGTTGTCGGGTTTGGGTGTGGGTTGCAGCGGTACTACTTTGGGCATTCAATTCAAAA GCAGTGAAGGATTTCTTGCAACTTTGACAGTTAATAACTTTGTTAAGAACATCATCTCTATAAAATTGGTACCTAACCGAACAAAATGGGCAAA CTGTCCAAAAAGTTGACCGGATCCCGGTCGGCGCCTGCTGCTGCTGCTGCTGCGTAAACTGAAAATGACCAGGCCGCCCCGCAGTAAAATTTAC AGGATGACCTTGATTCCAAGGATGCGGCTGGGCATTTGATGGCCTGCTTGGTTGTCTCGGGTTCCAACTTTGTGCCGATACCTTCCCAAAAGAT CTACGCTTGCTGTCATGGAGCAATCTTTTATCACGATCCAAAAGGATTCTTTGAGCTTCACCAATCAATTTAAAAGCATCAGTAGAGCCAGAAA ACTTGTTTTTATCGGGATGAAGTATAAGGGCTAATTTTCTGTACTGCTTTTTAATTGATGCTTCATCAGCAGAAGGCTCAACTTTGAGGATAGC ATACCAATCTTTCTCTGTTCCGAAGGTTTTCTTTTCACCAGAGATGTGTACTTCACATACTACAATCATTTGCGAAACGTTTTCAAGTTCAGGA TAAAGCTGTTGGGCCTTGACTGCAATCTTTAGAGCCGCGGAGAAGTCTTTGTTCTCCATCTTCTTTTCCGCCATCTCTTTGGCCCTCAACGCTT CCTCTCTGTTGCACTCCATCACTGACCCTCGAATACAGCTTCGATGACCTTCACCTCCTCTGCTGCTGCTTATTCTTCAATTTCTTGTTATTTG TTTTATTTGAATTGAGAAATTGAAAATATTGTTCGTGGGAGGAAGGAAGAATG |
Primers for UN08080 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | ACAAAATGGGCAAACTGTCC | 59.836 | 20 | AGGTATCGGCACAAAGTTGG | 59.993 | 20 | 191 | 269 | 459 |
| 2 | ACAAAATGGGCAAACTGTCC | 59.836 | 20 | GCAAGCGTAGATCTTTTGGG | 59.845 | 20 | 212 | 269 | 480 |
| 3 | ATGGGCAAACTGTCCAAAAA | 60.344 | 20 | AGGTATCGGCACAAAGTTGG | 59.993 | 20 | 186 | 274 | 459 |