Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN07752
AGCAGCTCCCTTTGGTCTTAACTAAGCATACAGCTTAACTTACATCAGTATGAGATCTGCAATTCTTTTGCGGCCAAATAATACCACTGCTGAT
GCATCCAAGGTATACAGAAACACCGATAAGCAGTCGATGCGTTTTGAAACAACGATAATTAAAAGTTCATGTCAATTATCGACGCTGCAACTCC
CAAGATGGCAACAAACGTAGCTGTTGTGAGTAGGAACTGAAATTGTATAAGATGGTTCTGAACATTACCCTGCTCTCTTAGTGAAACGACGGCA
TAAGTATCACTTGATATAATATCACAAACAACAACATTTGCACCTTGAAGAATTGTGATATTCAAGTTTCTAACAGCTCCCTGTACCTGTATCC
ATTCTAAGAAATAGCAAAACATGATGACTGTATGAAAGGACTTGGTTGCGCTGATAATTTTTAACAAACTTCAACCGAGTTTACAAATAACGGT
TTCATCTTCATTCACCAATTTCCTCATAAGTCTCTCATCTCTCAGGTAAAACCTGTTATTGGGTATTTGTTGTGAGCCGGATTCTTGACACTGC
ATGTGCGGAGATTAACTTTGGAGCTCTTCTTCTAGGAACTGTTTTCACTTCTTTGTCATAACCAAAAAACGGTTGGTAATGCTGACAAAGTTGG
TCACAGTTTCGCATGTACATATATTTTACTGGAGGGCCCGACACTGGTAGCTCATAGCTGCATAGTAACGGGTATGGTTAAGTTAGTATTAGAT
ATCCAACACACCGGCGATCCTTTGAAGGAAGAAATGAGTTATCGAATAACCTTGTTGACTGCCATGTATCTGACTATTATCTGCGGATGAACCG
GACTAATTTACCTGTGCATGATTGGTAACACCTGCAATTAATGGTTATATGTATTCACTACGACAACTGTCAGCTGTGACATGTGTTTGTCTAT
GGTATACTTACACCTTGAGTAACACATTCCACGTTTCTATAGCCAGAATCATTGAAAGATAAGGTCTTTTCGACATGTGCATATTCATTCGAGC
ATGGATAGTAGTTGTATCAGCCAAAGGAAACTTCGGCGCTGAAATTGTATGAGTGATACATCTGTCGCTGTTATACAAATACCATATTTATTTT
AGTCTACCCGTGGTTCCCGTCGATAGCTTCTGATATTATGCATACTGTTATGAAGCAAAATTAGAAGGTTTACAGCCATTTGTTGTACCAAAAT
AAACCGTAACAACGCTGGGAAACCTCGAGTACTGAAGGTGCACACCAATCATTTTCCTGTAGAGTGGTCAAAACGGTTGCTGTTTGTGTAGGCA
TACGTCTGCTGACCAAGCGCGTTCGTCTATTATTTTCATGTAATGTGCTGGGACCTGCTTCCCCATGCGATGTTGCATCTACGGCCAAAGGCGT
TGCACGACAATTATGGGCATGCAAAGCGCGACAAACACTTTCCAAATCTTTGACCCCGTGCGAACTGCTGCATATATTTTGCTTTGGTTCATTT
ATGCCTGATGTGCCACATCGTGAGATAATTCAGTCATTTTTATACTCATGAATGTCATTTCAGCTCGTGCCTTAACATCTCTGAGCTGAGCTTC
CTTGCTTCCATAATTTGAAGGAGGAATAATTTATAGCTACCTCTTGAGTTAGTCCTGGCATGACTTCATCCTCTTACTTGCCTCTTCAACCAAT
AAGATCGTCGCGGGAAATAAATTTAACAGACATGGAAAGACTTCACATCATAGATTTCTTAGATTCACTTTTGCGTCTAATAGGGTAAGCTGCA
AAAATCATCAGCAAGGCAGCCTTTTGGTGATCTCTTGTTTTATGAAGAAGATTTGATGAGATATCGTATGTAAAACTGGTTCTTGAATCAGTGA
AGTTACTCATCACATATGGGGTGTACCGGCCTTCTTGACCCCACCGGAATCCTACCTACAACGTCGTTGCCAACGAAAAAATACGACGGAATTT
GTTCGGTGTGTCGGAGTGTGTGTGTGTTTTTTTTGAGTATTTTGTTGGGAAGAAGATTCAAGAAGAAAATGGAAGGGGTGGATTTATTAGAGAT
GAGAGAAGCTTCAAGAGAGGAAGCAAAAGGCAACTGTTTAGTACAAATGAGTAAAAAAAAAATTGAAGAATCACATACCTCTCAGCAAGTGGGG
TGTGT

Primers for UN07752 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1GCTGCAAAAATCATCAGCAA 59.9620AATCCACCCCTTCCATTTTC 59.99620278 17812058
2ATACGACGGAATTTGTTCGG 59.82320CAGTTGCCTTTTGCTTCCTC 59.99320144 19612104
3CAAAAATCATCAGCAAGGCA 59.80920AATCCACCCCTTCCATTTTC 59.99620274 17852058