Simple sequence repeat (SSR)
| >UN00808 TGAGTTGACTCTTTTTCATCACTCACAAACTGAGAAGTAGAGTCTTGACCAGAAAAGTCCTCATCGGCACTACTATGAGTTGACCTTTTCTCTT CATTCACGGATTGAGAAGCAGAGTTTTGACTCAAAAAGTCCTCATCTTTTTCACGTTCATCCTTTTCCGATGCAGCATTACTATGAGTTGACTC TTTTTCTTCATTCACAAATTCAGAAGTAGAGTGTTGACCAGGGACGTCCTCATCGGCACCGCTTTGAGTTTGCTTTTTCTCTTCGTTCGCAGAT GGAGAAGTAGAGGGTTGACCAAAAAAGTCCTCAACTTGTTCACGTTCGTCTTTCTCAGATGCACCATTAATATGAGTTGGCTGTTTTTCTTCGT CTACATATTGAGAAGTAGAGTGTTGACCAGAAAAGTCATCGTCAGCACTACTATGAGTTGAAGCTTTTTCTTCATTCCCAGATTGAGAGTCATC TTTATCATGTTCATCCTTCTCTGATGCAACATTACTATGAGTTGACCCTTTTTCATCACTATCAGATTCAGAGGTTGATGAGGATTTCGAACTT TCCTCAGCCATATCAGTTAAAACTTTACTCAATTGGTCTAATATATTCTCATTGGTCACCTCTTCCTCTTCTTCTTCATCTCCATCACCTGATA TATTATTCTCTCTGGAATATTCACTTAAATCCACACCCTCACGATTTCTATTACTACCACTTTCTCCAGAGCCTTCATCTTCATAGTCATCCTC ATCTTCATCTTCATTATTTTCAGAAACACGGTCTTCATTATATTGAAATCTGAAACCATCTGCGAAGGCAGAATACTTTTCCCCTTCTTCATCT TCGTCTTCACTCGAGGTTGTGCTTGTGCTTGTGCTTGTGCTTGTGCTTTTGGTTGTAGAAGTTATGTTTTCTTGTACCACATTCTTATCTAAGC TCACATTTTCAGTAGACTTAGGTTCACTTGTTGAGGCAGGAAATGATTGAAAAGTGTCCCAGTCGTCTTCCTCTTCATCTTCTTCGTTGTCATC GTTAGAATCATCACTGACTATGGTGGCGGCTATGGGTGGCGAAATTTGGCGTTTGGTTTCTTCTGTTTGTGATGGCATCTTAATGACCAAAGGT GGCATTTGAGATTTAGTTGGAGTTGAAATCTGATCTTGTGTTACAGAAGCACGGATTATTTCCTGAAGTTTTTGCCTCCGTGTAGAAGGCATCG ATAATAATGCATCCTTGAAGTAGCCTGCAGAGGTTTGACTTTGAGCAAGTTGAGAAACAAGCCTCACGGACGCAGTCTTCAATTCTTTGACTTC CTGAGAGGAATCATTTTCT |
Primers for UN00808 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | TTTCCCCTTCTTCATCTTCG | 59.24 | 20 | ATAGCCGCCACCATAGTCAG | 60.118 | 20 | 238 | 830 | 1067 |
| 2 | TTTCCCCTTCTTCATCTTCG | 59.24 | 20 | CGCCACCATAGTCAGTGATG | 60.136 | 20 | 233 | 830 | 1062 |
| 3 | TCCCCTTCTTCATCTTCGTC | 59.213 | 20 | ATAGCCGCCACCATAGTCAG | 60.118 | 20 | 236 | 832 | 1067 |