Simple sequence repeat (SSR)
>UN07366 ACGGCTGCATTACCAAATATGTAATCTATGGTCCCATAAATGTCACATTCTCGGTAAAATTGCCTGAAGGAGTGGACGTACAACGTGTCTTGGT AACCACTAATTACACATCTGTACACTGCTGCTAAGTCTGCGTTGATACGAAGGGCCACTGCCTGGTGCTTTTCTGCTCCTGCCATGTTATAAAA CCCAATGTCACGAGCCAAGAATCCTTCTCCCGACACAGCAACAGTGGCAGATCTGAAAGTAGTCCAACCATCAATCATGCTTCTGTTACCGCTG ATTATTGTGATATCATTTCCTTCGCCAAGTAGAACAATGTTGGTTTTGTAAATAGGGATCTCTACGTTTTCTTCATACAAACCCTGTTTAATGT AAATGATGACTCTGTCAATGCTATTGTTTGGAGCAAAATTTATGGCATCTGTGATGGTTGTGAAGTTGCCACTCCCATCTGTTGCCACGGTTAT GGTATTCTCGTAGTCATTGTCATCATCATCATCATAATCACTGTCATCGTCATTAATGTGGAAAATCTTGTTCCTGGATGGCCACTTTGGAAGA TGAGTGTCTTTGGTGGTTGCAGTGTGGAGCTTTTGCCTTGAACCAGATGCTGCAAGAGAAAGGGCATTGCTAACATGTTTGTAAGAAGCGATTA CGGTGTCTACTAGGAGTGGTTTAAGAGGACCAGACGCAGACTCGAGTCCCTCTAGACAAGTATTCTTGTTGGTGACTGCTGCTGCAAGGAAGGC CCTCACATCGTCTAAGTTGTGGGCAGAAGAAGTGAGTCGAGTGAGCGACTTGTTCAAGGCTGAAATAGTTATTTGGTGAAGTTCGTTGCAGTCT TGAATGGTTCCTTTCTGTTTCTCAATAATAGTATTACTTTTGTTATCAATATTAGACAGCAAATCTAGTAGCTTTACGCCTTCGGATATGGCAA CTTTGAG |
Primers for UN07366 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CATCTGTTGCCACGGTTATG | 59.988 | 20 | CTGGTTCAAGGCAAAAGCTC | 59.993 | 20 | 159 | 452 | 610 |
2 | CATCTGTTGCCACGGTTATG | 59.988 | 20 | GTTCAAGGCAAAAGCTCCAC | 59.859 | 20 | 156 | 452 | 607 |
3 | CATCTGTTGCCACGGTTATG | 59.988 | 20 | GCAACCACCAAAGACACTCA | 59.726 | 20 | 133 | 452 | 584 |