Simple sequence repeat (SSR)
>UN07163 CTTATTTTCAACTAAACTACATATCAGAACTTAAAAAGGTCTGTACAAGCTTTACAAGCAGATCATACTCTATACAGCTTAACCTCATCACCCC GACATCACTAACTTTGGATGCAAAACCAGGGGTAGAAAAAAATTCTATCAAAAAACGCTTTGCACAAAACCTAGGGATCGAAGCAGTACAAACT AATTAATGAACAACAGATGATGAAACATATGAAGACATGACTTAGTCATCTATACGTTGAATCTCTCCCATCATTATCCGATTGCTGGTAACCT TAAACCCAAGAAGAGCCGGGTCAATTTGCCTACCCTTTTTCCCTTTCTTCTTCCCAGTTTTACCCCCTTGTCCATCTGCACTTTCTAAAGCAGC AGCAGCAGCATCTGGAAGGGGTGCAGCTTTCTTAGCATTGCTTTTAAGCATGTCACTGAAAGATGCAGTCTCTGACACATCAGCATCACTATAG GAAGATGTTCTCCTAAAACGAACATCCTTGTTGCTAGCTGCTGTGTTCTCGATGACCTGTACATTGCCTCCAGATTCCCTTCTTCCGCCTTCAG GAGAAATCATGGAAGGAACAGCCCTCCCTCTGACATCCGAATTTGTTGCCAGCTCAGCTAACCCTTCATGTGATGAGGCTGCACGTGGAACTGG TGGACGTTTAAGCAGAATATTTTCAGGCCTTTTAGATGTCACTGTCATCCGATCATAAGGGTCTCCTGAAAAGGAATCAATAGGTCCAACCTTG TCATTGTATAGGCCTGCATTCCCAACACCAATTCCAAGAGAATTTTGTCTGCCAAGAGCATTTATTGGCACTCCGCCGTGATCTATAGCACTAA CACCACTATGCTGAGCAATAAATTCTTGTGTTTCTGCAGCCGTGCCCTTCATTATACTACCTTCATCTTTAACC |
Primers for UN07163 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CCCTTGTCCATCTGCACTTT | 60.111 | 20 | GGAAGAAGGGAATCTGGAGG | 60.008 | 20 | 210 | 347 | 556 |
2 | TTCTTCCCAGTTTTACCCCC | 60.159 | 20 | GGAAGAAGGGAATCTGGAGG | 60.008 | 20 | 227 | 330 | 556 |
3 | TGCCTACCCTTTTTCCCTTT | 59.939 | 20 | GGGAATCTGGAGGCAATGTA | 59.894 | 20 | 241 | 309 | 549 |