Simple sequence repeat (SSR)
>UN06926 TTATCATCACTTCATTACTAATCCTTACCCCACAGTTTCTTTTTCGTACAAACATTCTACTATTATTTTGTGTGGAAATGGAAGAGGGTGGTTT GCATTACTATATGGCTAAGGAGACTTAGATTTCACAACTTTAGCTGCATCCTTCAACATCCACCTAACACCATTCACAAGTTCTTCCTTTACCA TGAACAAAACGGCTGCAGCCAGAACACTTTGTACAATCTTTGTGCTCATCCCTTTGTAAAAGCCATGGAACCCTTCGTAGCGTATCATCTTTAG AATAGCATCCAGTGTCCCTTCATACTGATGTTTTTTGTCTAACCCGATGGCTTGTCTTGCCTGAAGTCTTGACTTTACAACTAAAAGAGGATAA GTCACCACTGTAGCCCCAAGTTTTGCCAACGCCCCAAGCAAAAATATCTCTAACGCAGTTACACCTTTGTTACTGTTGCTTAAGGCACGACGCT GCTTCAACTTCTTTAGTAGGGTCTCATATAGCATAAACTGTATCGAAGGATTGCTAACCATAACCAATGTCGGGAAGACGCCTTTCCAGAATCC CAAGATTCCAGCTTCACCAAAGACTTCTTGAACCGCATTGCTAGTTGCAAATGGAGGTGGTTCTAGTCCACTAACAATCAGATCGGTTGGAGAT TTCTTCGTGTGGGTCTGCATACGAGTAACAACTACCCATATAGGATTTGTCAGCAGCACGTTGACACACCCAGACATTGCAGCCACCATGAGTG ATGAAAGCATCCCAACCGATCCATCTCCAGCTCCTTCTTTCTTACGTCTTAGTGCAGTAGCTTCAGCTTTGCTCCTGAATATTTGATAGAAATA ATAGTAAACACCCTGCGAACACGCGGTCCCAACCAACGAAGGCGCCAATCCGCTATATAACCGGCCCCAGCCTTCTTGCTGAACAACCTGTAAC ATCTGTTCAACAGTCCCCGCCTTATTCTTCTTTTTCTTCGGATCTCTATCAGTTTGCTGACGTGTATTAACCTATCATCAAATAAACTTATTAT TATTATTAGTAAAAAAATTAGTACGAAATGAGGGTTAAAATT |
Primers for UN06926 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TCCCCGCCTTATTCTTCTTT | 60.034 | 20 | TTTAACCCTCATTTCGTACTAATTTTT | 59.003 | 27 | 120 | 954 | 1073 |
2 | TCCCCGCCTTATTCTTCTTT | 60.034 | 20 | TTTTAACCCTCATTTCGTACTAATTTT | 59.003 | 27 | 121 | 954 | 1074 |
3 | ACAGTCCCCGCCTTATTCTT | 59.962 | 20 | TTTAACCCTCATTTCGTACTAATTTTT | 59.003 | 27 | 124 | 950 | 1073 |