Simple sequence repeat (SSR)
| >UN06918 GGAATTTTCTCAATTGCTCTGGCATCAACGTCATATTCAACCACAACAACACCACGTTTAGACAGGCCTCCTCTAATTTCTTCAGCATGATAAG TAACGACACCTGAGTTTATAAACATCTAGCAGTTAAAACCTGCAGTAACATTCAGTAAGCCAGAACCTGATAATCTGAAAAGAAGGACACAGAG TCTGGATGGTTTTAGTTGACATCCTTGAGTCTCTTAATTAAAGAGTCTAGAGATTTTTTCTTCGGGTTTGCCTTGTATCCTCGTGATCCAAAAG TTCCAAACAATCGCTCAGAAGGATCCTTTAGTTTCTCTGATATGATCCCTACTTTTCTGTAATCCAGAGCGTTGTAGCTTTTCTCCCTGATTAC CGGATTCAAAAAGTTCTCTGGATTATTGCTGGTAAGCAAATTAACTAACTGCCTTGCCTCGACAAGTGCTTTCTTCAACTGTATTGCCTCTTCT TCGGATACAAGCGAAGCTTGGTTTTCAGCAAACGATTCCAACAATTTGATATCTACATCAATCCCCATCACAGCATTCAAGCTGAACCTTTTCA CAGAATCGCTAACTAAAAAGTTAACAATGGATTCCGAGATATGAGTGAGAACATCTTGCAACACCCGTTTAAGGACCTGACCCGGCAATATCTG CTGTGCAGTGGAAAGCAGAGTTTCCAGAAAAATTATCACCTCATTTACATATTCATTTTCAGTCTGAGGCGGCTCGTCAACCATCCAGTTCACG TTCTCGATCAATGTCATGAAACCATCTACCTTCTTTTTAAGCAAGCTGGATAACATTTCTTCAGCTGCATCACGTGCTTTTGTAAGCGGAAACT GCCGTCTACTCCTTTCCACCATTCTCAAAGGGATACCAGAAAGCTTTGCAGCGTGACGAAAGAAGAAATCACAGGCTCGTTCAAGAACAGCCAT ATTAGCTGCAACAACCATTGCTTGATTAACCCCGCTAATTGAAGTGCTAATAAGCTTTAATAGGGCATCATCAAGGACTTCAGTCAAAAGCCGG TCCAAGTACTTCTTCACAACATCATAGAAATCAAGCTGTCCGCCATGCGACATAAAACTTACAGAATCCTCGATAAACGACCTCACAATTCGAC AACAATCAGGCACGGTGGATGAAAACGGTGCAATATAAGGAAACGCGGGTACAATATCAGAAGTTTGTATCTGGAAAGAAAGCACGTTCATCGA ATACTCGTACTCCTTATTCATCCACATCTGCTCAAACTTATCCGCCGCAAGAGCTTCCGCAATTTGCTTCCGACAATCCGATAACAACAGCTCA TGATACTTATCCCTATGCTTATTCAACACATCAAGCAACGCATCAACCGAGTACCCGTACCTTCTCAAAGTAACACCGAGCAAACTCACATAAT CCTTAATCAACAACAAATGATTCGCCGTACGCATCCTAGAAAACTGATCTTCCAACACAGAACACATCTTACTAACAGCCGTATCCCACAAATT CTCCACTTCCATTTTATTAATCAACCCACCACCAGTCCTCAACACCCGATCCTCAACAATAAAAAACCCCGCAATCTGCGCGAAAAACGTCTGA TGAGACTCCAAAAACGGCGTCATCGACGAAACCTGAAAATCCGACGTCAACTGAAGCTTCCTATTCTCGAAATAATACTTCTTAAACCCATCCT CAAGCCCTAACGTCTGATGAATATGATACGACCTATACAACGGAGTCAAATCAAACCCTAACGCACCACCACCACCACCACCATCACCTCCGTC ACCTCCACTAACAACACCGTCATCCTCCGCCTCCTCAAGCGCATAAACCGTATCCCTCACACTCAACCGACTCTGCTCCTCCGCTTGCCTCTGC CTAATCCTCAACTCCTCCTCCCTCTGTCTCCCAGCCGACGCTTGACCAATCGCCACCTGCCCCAAATTCCTACTAACCGTCCGTATCTCCACCA ACCAATCCCCAAACTCCTTCCCAATCCTGCGCTCAATATCCAACCTAATCGCCGGTATAACCTTCTCCAACATCCGCCTCAACGTACTACTCGG CACCTTCCCAATAAACTCCCTCTCAATCAAATCAACACATTTCAACGCCATATAAAAACTATCATTCCTCAAATGAAAATTAACGCGCGTACAT ATCTCCATCACCTTAACGCACACATTCAAACTCTCAATCGCCAAACTAATATTCACACATTTATTCCTAGCCTCAATAAACTCATCTAACGAAC TTAACAACGGAACCGCAACCGACTGCAAGAGACGGTTAGAGTTCGATATATTCGACTTAAGCGTTTCGACACCGG |
Primers for UN06918 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | TCGACGAAACCTGAAAATCC | 60.051 | 20 | GCAGAGTCGGTTGAGTGTGA | 60.03 | 20 | 242 | 1621 | 1862 |
| 2 | GACGAAACCTGAAAATCCGA | 60.051 | 20 | GCAGAGTCGGTTGAGTGTGA | 60.03 | 20 | 240 | 1623 | 1862 |
| 3 | GACGAAACCTGAAAATCCGA | 60.051 | 20 | GTCGGTTGAGTGTGAGGGAT | 59.969 | 20 | 235 | 1623 | 1857 |