Simple sequence repeat (SSR)
>UN06513 GCCCATATCTTTGGGCCGCCTTTCTTGGCCCTTTTGTTTGTAAAATAGTGGATGTGCATAAGTATTAGTCTCAAGACAGCCTATTCTTGTTTAT TTTGATGATATCGCCTACATTTAGAAACAGGTATATATATATAGAGAGTAACAGAGGCTCAGATCTATAGGCATGAAACGGGTGACAAAAGCAT CTAAATTTTGTCGTGGCTGCAAACAGACTCAGTTGCACAGCAGTGATAACTACCATACCCTCAGGTCATTGCCTTGCCATGTGACAGTCAGATG TTCTACGACCCGTTTCATTTCGATCAAACTATAACTATCATCACTGCCCATTATCATATATATACATGACGCTCCCAAAATAGGAGGGGCATTA ACCTTGGCATTCAATTATTATAAACCTTGCTACAACCGGCCTTTTTTTTCACCATAGCAATGATGACAACAAATTTCAAAAACATTATCAGAAT CTTTTTGATTATAACCGAACCTATTCAGATTCGAAGGGGCCACTTACTATAC |
Primers for UN06513 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TTTCTTGGCCCTTTTGTTTG | 60.081 | 20 | GATGCTTTTGTCACCCGTTT | 59.978 | 20 | 169 | 21 | 189 |
2 | TTTCTTGGCCCTTTTGTTTG | 60.081 | 20 | ATGCTTTTGTCACCCGTTTC | 59.978 | 20 | 168 | 21 | 188 |
3 | TTTCTTGGCCCTTTTGTTTG | 60.081 | 20 | GCTTTTGTCACCCGTTTCAT | 59.978 | 20 | 166 | 21 | 186 |