Simple sequence repeat (SSR)
| >UN06430 CACAAATATCTAAACAAAAAACCATACATAAATTAAAGTAGGTGTATTTTCATTTATCCAAACATTATTGGGATCTGTATAGTCACTTTGTTTG GGAAAAGACGAGTGAGCTGCTTCATCGTTTTGGGGGTCTCTTTGCTTTTATCATGCAGTCTACCGAAACTACTATCCGGGAAAGCCAAGTCAAG TAGTGTCGTATGACTGCTCCCAAACTTCGTGAACAATAACCCTCCCGGATGAGATTTTTCCTTGCGGCTGTCCATCTGAGTGTGTGAAGCAATG ACAACGACATTCCCGGGTAGGCTCTCGAGCTTACTTTTGAAGGAACCATAGGCCTCTGTATTTCCCAGCATAGATTTCTCTATATCTTTCACAA ACAAAAGCAAAGAACCGTTCTTGCTTTCTTTAACAGCAACCCCCAAAAAGTTCATTATTAATGGCAAGCTTCCCGATGTCACCGGCACTCGAAG AATCAAGGCGAAGTGTATCAGCAGAACTATAAAAACCCATTATCTTCCTCACAAAGTCCTCCAAGATCATTGCCTTCTTGAACTGACCTATCGA ATCTAACACCAATCTTGGAAGATCCATTCTCTTCAAATGGAAGTAAAACTTTGCCCTTGTAACCATACGCGGGGCCCCTTAATGGAGCCTGCAG AGGAGAAAACCCAGACAAGGAACCCACAAACTTAACTCTATCACCTTTCTTAAAGGTGTAGGTTTTTGATGTGGCAGTAGATGCCTCCTGTTTT GGCTGATGAGCATGAGAGCATGTGGTAGATCCACCAACTATATCAGCCTCGACACTTGATGTTGGTTTCCTAGAGTGCAAAACCCCCGACTGTG GAGCACGTTTAGCAAAGACACTTGCTCTTTCGGGCCTAGTACTCTCCTTTATTGTAGTGTGATCAACTTCCTTAGCAGCTGATCCACCAGGTAA CAGAAGAGATTCAACTACAAGCAGTCGAGCACCGAAATGTTTTGCTAGAGCCTTTGTCAATGTTTCCTGGTATATTTCTGAGCCTGCTGGACCA GATAAGAGTATCCTGGGGCACAAAGTAGGCAGATCCGAGGCATACTTCACAAACTCATTATGTTTTAGATGTATATAGGTGGATGTAATTAGTA CATTCTTTGTGGTTTCACTTAGATAATATGGGAAGTCATTAAACGTGACTTCAATGGTATCGGGATCGACAATTCCTTGTTGTAAGCTATCTTT ATATGCTTGACGCCGGGCTGCTAATGAGATCGGAGGATCATTATCCTTTTGCGACTCTTTCCGCTCATCAAGAATTTTCAAGATATCAAACTCA GAAGCAGAGGATCCAGCAAGCATACGCAGAAGTGGTCGCAATTCATGAGTTGCCACAGGAGTGTTTCCCATCTCTGCATCAGCCGGAGCACCAT CAAGGTTTTCATCGGGCGTAACACCTTTCTCACTATCATTGGGATCAGAAGCATCCTTCATCTCAGTATCTGTTGCACTACTATCAGGCACTTC ACGAGTAGAGGGCAGATTTGGCATTCCAGTTTGTATGCCTTTGCCTTTGCGAGAAGGCGGGGGAAGAAGGGATAACTCTTTCTGAATATTAGAC AAAGATGCTAATATTGACGCTCCAGTGACTGCAGATGGGTCTCTAGATCTTGCTTCAAACTGCAATCCTTTTAATGAACTACTGTGCGCTTCTA GTATGCTCACCGAAGGTGCCACATCGGCAGCAACATTATCATTGGATAGCTGCTGGAATATATATGAATGTCTTCCCGAAGAGCTAAAAATCAC TTCGTCTCCAGCTCTAAGTGGTAAGGTAGACCTTTTCTGGCATGTCTTTCCATTAACTTTGACTGAACCCTTGCCTCCAGTGATCTCGAGTAAA GTGATGGATGAACCTCCTTGCTGTGACTCAATGTGTCTCAGACTACACAACGATTTACTAATGGATGGATCACCAAGTGACAAGTCACATTGGC GGCCTTGTCCAACCGTGAAAATTGAACGATCCATGACAACATGAGGATTCTGCGAACACTGCGATAACAGCTTTCCCCAAGCACCAACTCCCAC ATTGGTTTTCGCCTGTCGTTTCTTATTCCTATTCAAAACACTCGAACTGCCACCGGTCGCCGCCTTACTCTTCTCCAAATCCATCAAAGATTCC CCTAAAGTCATCGGAGAAACCAACGGCTGCCCATCCTGACCCTCCTCGTGTCCTCCAACCGTCACTTTATCATCTTCTTTAAGAGAATCTTTTA ACGGATCATCAACAGACCTAACTTCTTCTTGTTCACGATCTTTAACAGCAATTGGATCTCCACCACTAGTTGATGATGAAGCTGCTTCAACCCC CTTGGATCTTTTATTGGAAGGAGGAAGCATTGATGAAGATGGGGATTCGGATAAGGTTCGTTTAGATGATGATGAGCTGCGACGTGTTTCGACC ATCGTTGATTTTGATTTTGATTTTGATTATGGTTGCGAAGGTCGTCCTCATCGGAAAGGTCAGATGATGATAATGACTTGGGAGCGTCTTCTTC AACAATTGGAATAGGAATAGGAGGAGAATCAGCAGCAAGAAAAATATCATTAAAAAACTGATTCTCATCAATCACATCATTATTAACATCATTC AAAAGATGATCATCGTCGTTCAAAAGAAAGTGCTCCAGCTCATCCAACGGAGACTGCCCTTCATGATTATTGTTGTTGTTGTTGGGAATTAGAT CGTCAAATAATAAAGTATTATCCAAATCAACAGCATCCAACACAAGATCATCCCAATCTGTCACCATCATCGTTTCTTCTTCCATATTTACACA CCTATTTATTTTAATTTAATTGGGGTTTCTACTAATAATACGATCTGTACGGTGGTTTTGATGATTTTTAACTACACATGATATGATATGGGGA TGGATGAATAGATAGAACAAAGGATTTTTATTATTATTTCACCAAAATTATTATGTAAACCATACTAGAATCGGTCAATTTATGAGGGTAGGGT T |
Primers for UN06430 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | TGACTTGGGAGCGTCTTCTT | 59.989 | 20 | TTGGATGCTGTTGATTTGGA | 60.049 | 20 | 249 | 2518 | 2766 |
| 2 | ACTTGGGAGCGTCTTCTTCA | 59.989 | 20 | TTGGATGCTGTTGATTTGGA | 60.049 | 20 | 247 | 2520 | 2766 |
| 3 | ACTTGGGAGCGTCTTCTTCA | 59.989 | 20 | CGATGATGGTGACAGATTGG | 59.918 | 20 | 279 | 2520 | 2798 |