Simple sequence repeat (SSR)
| >UN00642 AGCGAACGTAACTTCGAAAACTGATTTTATATATACCTTTTTTTCCACTAATTAGCGTCTAGAGAGTCTAAATAACATGTCACAATAGTAAACT AAAACGGCAATATGATCTATGCACATACTATATTATTTAGCCATATCCTATCATAATGAATCTCCTAGTGTCTTTAGCTTCAGCATGCTCCTTA CAGTTGACCTATGAAGTTGTGCAGATGAAAGTTTGCGTGCAGAACTGCAGACCTTGCACAGTCAAGTAGGTCTAATAAGCACCACCGAACCGCG TATTTTACCCCTCAAATAAGTAAATAATCATATGCAATATACATCCAACCACATCCACTTGCTGCTACAAACAACTGAATGACACACGGCCTCG ACTTTGCATTATTTTGTGTGGGAGAAGGAAACAGTTCCGGGTAAACCACCTTTGCTCAGACCAAGTGTTATCCCATTCTTGTGCTTTTACCAGA TTTCCCAAACCTTTAACGTCGGTTAGCAAGACGTGTGGCTCTAACAGCCAGCGTAGCGCATTTGCAGTGAATGAGTTCCTACTCCATGGACTAC TGAAACCTAAACTCACGAAAACACACAATAAACAACAGGTGTCTTTTTCCATATTATTCACATGGGCATCCACACACTTAGAAACAACTATCTA TATGCATCCAAATAAATCATTTAATATACCCTCACACGACACACAACTCTGTTCATTGTTTGAAGGCGACACCAAACATCCCTTTTGTACAGTA TCAATGCCAATAAGCAAAAGCAAAGAACCATTTAACGTCAACGTAATACCATACATACAGCGTCCCTCTTCGCGCCTGTTTCTTGTCTATAGGC GTAGTTTTCGATAACTTCGTAATCGAGAGACTCGACTCCATCAAATCCAACGCTTCTCAAAACACCGTCTCCATCATCTGTTTCGCCGTCTTCT CCGCCTTCATCTTCAGTGTTTGGGAGTCGAGACCAGATCAATTTGGCGGTCTCGACTCCGTTCTGAAGATGATTCGATAACATTATAATTACTC AATTAGGGCTGTTATCAACAGTGTGTGTTTGTGTTTATAGTTATTGATCCTCTTTCTTTCTTTCTTTCTTTGATAAGAAAGAGGATTAAATAAT GAGAATTGATCCTCTT |
Primers for UN00642 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | TCTCCGCCTTCATCTTCAGT | 59.95 | 20 | GGATCAATTCTCATTATTTAATCCTC | 57.725 | 26 | 203 | 938 | 1140 |
| 2 | CCATCAAATCCAACGCTTCT | 60.074 | 20 | GGATCAATTCTCATTATTTAATCCTC | 57.725 | 26 | 257 | 884 | 1140 |
| 3 | CTCCATCAAATCCAACGCTT | 60.074 | 20 | GGATCAATTCTCATTATTTAATCCTC | 57.725 | 26 | 259 | 882 | 1140 |