Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN06324
TAAACATACTTTGCTCAAAGATGTTGGCCAAAAAAGCCACCATTTGTAAATACTGGAATACAAATCAAAATCTATAGAAATACAAAGGTTAAAA
AGAATAAGTTTTTAAACATATCCCTTTTTCCATAAACCAATAAACTCTGAAACTCATTATTTTCTAAGCATACACAACATCTTCGCCGTCTTTC
TTTTCATACTCCTCACCTTCCACTTCATCGGCATACTCACCTTCATCATATTCATAACCTTCTTCACCATCCATTGGTTCATACTCGTACTCTC
CCTCCCCGTCATCCTCATACGCTTCAAGCTCCTCATCAAGTGGCGCATCTTCATTAACCAAACCATCTTCTGTTTCTCCCTCATTAATATCATT
ATTTACAGATGTGCCATCCGCTGGCTTATCTTCAACATTTTCAGGTTCAAAGTCGGCTGGCACAGAATTGTGTTCCTCTATTGCCTTCAGGTGG
TGGTTGTCTTCAGTATTCACAGAAGAAATGTGATCTTCATTATTGGTCTTATTAGTATTGGTATCAGTATTATTATTAGTAATCCCTCTTTTTC
GCTTCAAAATTTCACTAAGAGGCATTGGGCCTTTGAATGATGCATCTTCCTCAGTCCTTGCGTATTTTCTTTTTCCCAAAGATTGATCCTCGTT
TGGCTGATGTTCAGTTCTACCACCAGTTTTTAGCTCGGACAGTCTTTTTGGTCCAGCAAACTTAGTATCGTTATCACTTATTCTGTCTCTAAAC
CTGGAAAGATGCTTCCTTTCTGTGTCAATTTCCCTCTCTGTTCGCGGGTTATGTCCGTTAGGAGGAGAGGCTGATCTTCCCGGAATCTTTATTC
GTCCTTGAAGTCGGCTACTGATAGCTTCACGGTCTTGACGGTAATCAGGCCGATGGTTATCTCTTCTTGGCATCCGGTCAGCATATTCGCGGCT
GGCAACAGATCTTGACCCATGGTCAGAACCCGAACCATAAGCCCTTCGTTGGTTCGATATACGTTGGCGTAAATCCGACCTGTTATACTGATCA
GGACTACTATTTCTATGATACGGTCTTCTTTCTTGACGGGTCTCATCCCATACATATTGACCGTCCCTTTCAGTATAATTGTCAAAATCTCGAT
GCTCTCGTCCAATCCGATCAACATTATAATCTTGACTTCTTGATTTAGCAAAACTTTCTTCTTTTTCATGATGATATTCACCATCTTCAATTTC
ATTATCCACAAGTACATCAAAACCAGGGGACGGTTCTCTTGAATATACATCCGCATCCTTTCCATTCAAAATTCTATCATTATGGAACCCACGG
TTAAATTTGCTGGATGGTTGTTCATTCACGACAGGCGACGGAACCACACGAGCTGGTTTGTACCTAGGAGGCTCCTCTACACTTGTACTAAAAG
ATGGCACCCTTTTATCAATAGCACCATTTCTAGCTGAAAAAGGTGTAGCTGAAAAAGGTGTCGGCCTTTGAGCGGTTGCTTGTTGTGGGAACTT
TTGCTCTTGAATGGGTTTATTCTGAACAGGATGAGATACCTTAGGAGGTTCGGGAATAGGGTTTGTGGGACCCGTTTGTGTGGGTTTGTTAATG
ATTGCATTTGGTGGGCCGTGTAAGAAAGGGCATAAGTGTCCTTTTAAACAGAAACCCTTCTGGAAGAAGATACATGCAACTCCTTGTTTGGGCA
CAGCAGCATACGGAGCTGGATGTGCTGGTGGTACAGAAGGACCCATCGGAGTAGAACCATCGGCTCCCACTAATCCATCAAGAGGAGGATGACG
GAAAGCGCATTTTGGATTTAAGCAACTCCCATTTAACCAATAATAGCAATCCCTGGGGTTAACCCGCGCAACATCACTATGGCGATACTCACAC
TCACTTCCCTTTTTGCAAGTTAAAGGTGAAGCAAGAAAGTAAACACAATCAGTGTTTCTTTTCAAGGTTTCATCTTCTTCAGTTGTAATTGCCT
GAGCTCCTGCTGCTGCTGCTGATGATGGCATACTTATTATTTTTTTTATAAAAGCTATTGGATCTTGATGATAATTGGATCTAGGGTATGTTAG
AAAAAAGGGTTTTTTTTTAATAAAGATTGGATCTTTTTAGGG

Primers for UN06324 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1AGCGCATTTTGGATTTAAGC 59.34920GATCCAATTATCATCAAGATCCA 57.88223266 17902055
2AGCGCATTTTGGATTTAAGC 59.34920AGATCCAATTATCATCAAGATCCA 58.84624267 17902056
3AGAGGAGGATGACGGAAAGC 60.73520CCAATTATCATCAAGATCCAATAGC 60.07725280 17732052