Simple sequence repeat (SSR)
>UN06312 CCGGTACCTACTTAATAAACATGTGGTGCAGACTTAATCGTATGTATTAAGTCAAAATTAAAGTACAAATTTGCCAAAGAGAAGATGATTTAAA GCATTTAAAAAAGTTATGACATAAGAAAACTACAGTACATTTGTGCTTCCTTCATTACTGGTATCCTTGCACGCCATGTGTTCACCTCCAGAAA CATTAATTAGGACTTAAAACCCTGAAGAGTGGTTTTTTCCAAAGCAAAAAAGGCGAGAAAACAATAACTCTTGAAGAACACAAACTTTGACATC AAAGCAGACGTTGCTTTCCCGTTACTGAATCAACAGTCGATTTGTTTCCAGGACCAATAGCAAGAACCGTTCTTGACCCTGCCGATACCTGGGT GCGTCCCGCATCAGCTACAACATAAGTTGGAAGGCCGATTCCCTCAGCCACTTCCTGCAGCTTATTCATTTCTTGTTGATTTTTACAAGTGACA ACTATTTTCGCCTGCCCGCTATGCTCCCACCGATGCAAAAGATTCCGATGGCTTTGCATTAGCCTAGAATATAATCCAGTGGCAGCATGAGCAC ATTGAGAAGCAATCTTTCCTTGCCCCATCTTCAAGTCTTGTCTAACAACGAGAACCATTTTAAGATCATCATCATCAGCAGCAGAAGGAGTAGT AGTAGTAGTGGTCTTTTTCCTTGTAGAGTTTGTTGATGAGAAGATGGGTTTTGATAAATCGAATAAGATACCGAATACGAAACCGATGACAAGT CCAGGGATGAAATTCTCCGCCTTAAAACTCCCACCAAACAACCATCCTCCTTCTCTCTCTACTTTCTTATTTTTTGAGTGCTGACGACCAAATG AACCCCCCGCCATTTTCCTTTTCTTTATTATCTCCCAGGAGAGG |
Primers for UN06312 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | ATCTTTCCTTGCCCCATCTT | 59.903 | 20 | GGACTTGTCATCGGTTTCGT | 59.973 | 20 | 179 | 576 | 754 |
2 | AATCTTTCCTTGCCCCATCT | 59.903 | 20 | GGACTTGTCATCGGTTTCGT | 59.973 | 20 | 180 | 575 | 754 |
3 | ATCTTTCCTTGCCCCATCTT | 59.903 | 20 | CCTGGACTTGTCATCGGTTT | 59.966 | 20 | 182 | 576 | 757 |