Simple sequence repeat (SSR)
| >UN06239 TGTTTAAAAAGCTACATAAACCAAAATGGCATAAACATATAAGGTTACTTTGTTATTTCAAGATAAGGTGACACGGTATATGACCAGTCATTGA ATAACAGTTCAAGTATATAACAATAAAACATACTCGGTCCCCGTGGCGTGGTTGGTAGTCACCCGGGTCGGAAACCTGATAAGCCATTGCTGCA GTTCCAGACGCTACCGAAATATCCAAAATGACTGCTGTAGAGTACTCTCAAACCTTCGTGCCAAGATTAAAATCTATTTGACCTCTTAACTGAA GTGAGCCATCTTAAAGTAACCTGTCTGATCTTTTGAATTGAGTGACCCTCTGACTCGTTGCTTTAATTTGACCAATTTAGAGAACCTGATGTGG TCAACCATATGACATATGTGCGCCGTTCCTGTCTTGTTCAGGTTCGGAGCTTGATTATGTTCATTGACTGCAGCCAAAAGCACTGTGAAGCTGA AGCTGTACTTTTTGTTCGGCAGTCTTTCTCACGCGAATACATGCTCAGTATAACCGTTATTCCAGCTCTTAAAGCCGGTTGGATTTAAGCTCAA GTATCTTCAATTCTTTGCTGGTTACCTTTATAATGAAGTAGCACAGTCCTTCTTAGCATGAAATCTTTCGTCTACCCCCTTTGAGCCAAATTAA CAGTGGGATTTGAAGAAGCATCCAATTCCCAATTAAAGACCAACGCGCCTGTTTCAACATAGTCGTAATAGCAGTCAAGATCACGTGAATAAGA TCTTCGGCACAGATGATAGCGAATTTTCCAAGTCCCTGTATAACAGTATTGAGTCAGATGAAGCACCAACCGGTAAATGACTATCAGCAACAGG AATGCACAGAGAATCCTGAGCACGAACCACGTCCGTCACAAAATCTAGTACCTTTATCGCACCAAGCCACGCTGCAGAAATATAGACATTGGAT CATAGATGTAACAGACCCCCTTGGCAAATTCATTACCTAAAAGGCATCCTTTATCTCCTTTGATGATCCAGATCTTGCATATGTTCTATTTGTT CAATCTTCTCCGAAGCATGCACTTTTACAAACAAGTTAGATTGCATCTCTGTATAAGCTCCTGACTTTGTTGCTTTCGTATTTGCGGCGTTTTC CCGTATACAGCTCATCCTTTTTGTACTCTCCCGGATTCCGAGTTTGCCACCTTTCTTTAGCATCACGGCTAACCGTATTCAAATAAGTTTTTCA ATTAGACTCCAATAAATTCTTTGAAAGCATCAACTGCTCCGCCCGAGGTTGATTATACTCCTGAAGTGCATCCCACACATAACGTGGTGATATT AGAGCAGAAAGTGATTATTTACGATAGTGGTTGGTAGCCCAGCTTCAGAATCATTTAGGCCTGCTATGCACATTTCTGCAAGACTCCTTTTTCC GATAGCATATCTCAATGATGTTGGATGCCTCTCCGCGTGCCTGAGTTGCGAATATGTTGTTTAAGTATCAGTTTCGTCATCCAAATGTTTGCGA AGGCAGCTGCAACCGCCACCACGTTTTTGGAATATCAACATCATCATCATCATCAATCTTTTCAACTTTTGGCTCTTCAACCTTAACGCCGTGG TCTTGGGTGGTCCTTTGCCTCTAGCGCTTCTTCTACCGACGATCAATTCGCAGACTACAGTTACATGCATAGAAGAAACGTAGAAGATCTGAAG GACCGACATAAACTGTGAGCCACCAACGTCAGAGAAAACGAAGAGGAAGCGGTGATGATGATGATGATGATATTTGATGCCCTAACCATTATAT TTTAATCGGTTCTTGTTGATGATGATGGGTTAATAGATGAGATGAGTGTGAGTGTGATTTCTGGGTTTCTGGATCAAGAGAGAGAGGCGGTGAG TGTGATTTCCGAGTCCTGTACACGTT |
Primers for UN06239 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | ATGATGTTGGATGCCTCTCC | 59.893 | 20 | GATCGTCGGTAGAAGAAGCG | 59.978 | 20 | 218 | 1425 | 1642 |
| 2 | CTGCAAGACTCCTTTTTCCG | 59.986 | 20 | GAAGAAGCGCTAGAGGCAAA | 59.867 | 20 | 240 | 1392 | 1631 |
| 3 | ATGATGTTGGATGCCTCTCC | 59.893 | 20 | GAAGAAGCGCTAGAGGCAAA | 59.867 | 20 | 207 | 1425 | 1631 |