Simple sequence repeat (SSR)
| >UN05818 GTCGTTTGAATTCCTTAATCGCCTCTGTCTTTGAGAACTCTTGCAGCTTGATTCCGCCAATTTTTTCATTGCCAACTCGACCCCACTTTCGAAA CACATGACAGTCAGACCCTTTATCGTCTTCAATGATTTGAAGGATATAACAACTGTTGATGCCAGTGGATAGGTCAGATAAGCTCAAAGTCGTA TTATAAATGCTTTTGCCATGCTCTAAGATATGGCCCGTATCTTGCAAGCCAGATGCTTCATGCACAGAACTTCGACCTTTGACTTTAACAGTGA CCATGCTTTTATTAGCCTCTTCACCGGCTTCAATCTTATACATGTCTAAACGAAGTTTTTTCTGTCTTTCAAAGCAGTCAGTCAGATAATCCTC CCTCACAATAGGTACTTTCATCCTCCTCGCCTTTCTCATCTCAGCATGCATATTATCCGGCACTCCACATACAACTAAGCAATTTGTGTCTTTC TTGACTTGTGGATGAAATTGTCCACCCAGGCTCTCAATTTTGTCCTTCCACACGTCCATAGTTTCAGATGAAAAACTGATAATTGAAACTTTTA AATCTGCCAACTTTTCACTGTAGGATGACTGACTCGTCCCGTTACCAGCCAGTTTTGCGGGAGTATTTGGTGTAGGTGGAGGCATTATCCTAGA AGGTTTTTTCGCCTTTTGTGTCTTAAACCACTTCTTTAGATATTGGTTTTTCCGTTTCTTCTGGAATATTCCACTTTCCTTTTACACGATCAGG CTCAGAAGTGGAGTTCGCGCACTTGCTCCATTCGGTTAAAAACCCTCTGCATTTGTAGGTGCCTCCTGAATAGTTAAGATGCCCGTTACAAAGT TTGCAACTTTCAAGTGCTCCAAAAAGCATCCCATCAGCACAGCGGTCACGGAGGTCTATCTCTGATCCTGATGTACTTTGATTATTAGCTTCCA GCATTTCCCGCAACTCTGCTGTTGATACATGGTTTTTAAAATCATCTTTAAGAGCCCATAATTCTTTTGTTTCGACCTCTAGCAGACTCTGCAA CTTGGAAGGATCCAATTCATTGTTTTTATTATCATCTTCGGTCTTAGCCATCTTTAACTTCTGGTCACGGTCAACAGCTCCTTTACGTTTAGCG CCTCCTTTTACAGTCTCTTTCTCCTCCTTCACTTCATCTTTGCCTTTTTTGGTGGCTGAAACTGTCTTAACCATCGAAATAACGGCTGACTTAT TGGAATCTGACAGGCTTTCCCACCCATCCAAATTTTCTAGTTGAGTAGTTGGAGAAGCGTCCAAGAAACATGTAGCATGATGCCATGCCAAGCC TCTAGCACCTTGACCCTCTGGCTTACTAGATATACGAACCTCTCCTGTCGCGATCTTTACACTGCAGATCCTACAAGTAGCACGAGTGGTTTTT GAAACTTCAATTACACATTTAGTAGCAGCTTGTGCAGGTGTACTTGGGGACCCGCCACCTCCACCTCCACCTTCAACATACTTTCTTATCTTCT GTTGATCTTCCCAACGAAGTGTTTCAATGCCTTCTACATCCTCACAGGATTTTATTTGTTTCGCCTTCCTCAGAATGCACGAAGCATGATTCCA CATAGGCATAAGACCATCAAAATGAGGGGATTGGACCATTTTTCCAAGACGCAATACTTCTTTAGAAATAGGGGATTTGCATGTTCTACAAGAT GATCTTCCTGATTTTGCATATTCTGCTTTCCATGGTTTTTCTGGTGTCGCCATTTTCTAAACACACAGTTACTGTGTGTGTGTGTTCTTGGAAC AGTGGCAGTTTAATCACTTTAATGTGTTGTGTTTTT |
Primers for UN05818 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | GAGGGGATTGGACCATTTTT | 59.996 | 20 | TGATTAAACTGCCACTGTTCCA | 60.534 | 22 | 181 | 1622 | 1802 |
| 2 | AGGGGATTGGACCATTTTTC | 59.996 | 20 | TGATTAAACTGCCACTGTTCCA | 60.534 | 22 | 180 | 1623 | 1802 |
| 3 | CCATTTTTCCAAGACGCAAT | 59.938 | 20 | TGATTAAACTGCCACTGTTCCA | 60.534 | 22 | 169 | 1634 | 1802 |