Simple sequence repeat (SSR)
>UN05638 TCCCTTAACCGAGTCGTTTAACGATAATGGAACATTATCTTTCTCAGAATCATCACTCTTTTTCCATTTCATAAAACCACTAAACGGGCTCTTT TTCGCCTTCTTTGCCGAGTCCTCATTTACCACACTTTCAGCCATCAGAATCGTCGGTTTTTCATTTTCTTTTTCTTTCAGTTCACAGTTCCAAA ACGGATTCTCTTGAGACATTCCAACGCTATTTTCTTTTCCATTTTTGATAGATGATGATGATGATGAGATACCAAGAACTGATGTAACTCCTTT GACTTGTTTCACGCCTAACTTTTGCTGCTTTGGCTTGTTTTTAGAACCCGAGTCTTGCAAATCGATCACTGACCATTCATTGTTTGGGTCTTTT TGTTGTGGTCCAGCGATGACGACATCTTTTGGGTCTATTTTTGCTCCTTGAGCTGTTAGTCTTTGCAACAGTGGTGCCTTTGATGCGTGATACT CCTCTTCTGATATGCAATTTGCATACAGCAACTCCTGTAAGAAGATCAGTTTATCCCTCAAAATAACAGGCTGCTCGAGATCAAACGGCGAAGA AACAATCGTCTCCAAAAGATGAGCCCGAAACACCAAAACCTCATTCTCCGCCAAAATCCCTTCCTTAAACAACCCCATCAAGTTCAAAATCTGA TGAAAAGACTCTTGCTGCCACTTC |
Primers for UN05638 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TTGCCGAGTCCTCATTTACC | 60.074 | 20 | CGGGTTCTAAAAACAAGCCA | 60.103 | 20 | 228 | 105 | 332 |
2 | CCACACTTTCAGCCATCAGA | 59.831 | 20 | CGGGTTCTAAAAACAAGCCA | 60.103 | 20 | 210 | 123 | 332 |
3 | TCTTTGCCGAGTCCTCATTT | 59.813 | 20 | CGGGTTCTAAAAACAAGCCA | 60.103 | 20 | 231 | 102 | 332 |