Simple sequence repeat (SSR)
>UN97965 TTGGGCAATACTAAGAGAGGGGTATACCCAAGCATAAGAAGCTGGCAAAATTTCATTATCAGCAAAACTGGTGAATTGTTGAACAAGGGCTTTT TCATACGGAGAAGATCCTTTGAGTTTTTCACTGGATACAAAATAGGCAATGGCAGTGCTTTCAGTCAGATATTGATTATTCTGGGACTCAAATG CCGGTACCTTTCCTTGGGGGAACTTCTTGAGGAAGTTCTCCTGTTTGTTGGTGACGCCGAATTCGAATGCCGGGTCGACTTTGACATCGGATCC GCTGTACTTGGCCGCTATGAGCACCTTATACGCTCGGAAGTTGTTCGAATACGTGTACAGGGTGCCTGACGCCATTTTTCCGCTTTCGATTGTA CGTTTTTCCGTGCGAGTATGTATATATATATATGTTCGTGTGGGTGCGTGACTTGAGCGTACGTCG |
Primers for UN97965 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TTTCCTTGGGGGAACTTCTT | 59.912 | 20 | ACGTACGCTCAAGTCACGC | 60.072 | 19 | 244 | 197 | 440 |
2 | AGCACCTTATACGCTCGGAA | 59.867 | 20 | ACGTACGCTCAAGTCACGC | 60.072 | 19 | 139 | 302 | 440 |
3 | GCACCTTATACGCTCGGAAG | 59.867 | 20 | ACGTACGCTCAAGTCACGC | 60.072 | 19 | 138 | 303 | 440 |