Simple sequence repeat (SSR)
>UN05636 CCTGTTGTTGATGCATTATTATTATTATTATTATCACCAAACACTCCTTGTTGGCTTGTTGATGAAGAATTAGAAGAAGAATTGTTTTGGTTTG GGGGTTCCGTTGATAGAAACCGATAACAACCACCAAATGAATAATAATAATAAGGAGGAGGAGGAGGGTTTGTTGTTGTAGTTATTATTCTTCG AATTGGACTAATGCTTTGTTTACCGTGTAATGATACCAACAATGATTTTGATTTCGAACAAGAAGAAACCAACCGTTTTGCTGCTGCTGATCGA TACATTTCTTCTTCTTCTTCTTTGTTTGTTTTGGTGGTTGTTTTTGAGTTTGGGGCTTTTGTTACTTCCACGTTAGTTTAGTTAGATT |
Primers for UN05636 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | ACCAAACACTCCTTGTTGGC | 60.012 | 20 | GTATCGATCAGCAGCAGCAA | 60.127 | 20 | 250 | 36 | 285 |
2 | ACCAAACACTCCTTGTTGGC | 60.012 | 20 | CAGCAAAACGGTTGGTTTCT | 60.147 | 20 | 236 | 36 | 271 |
3 | CCAAACACTCCTTGTTGGCT | 60.149 | 20 | CAGCAAAACGGTTGGTTTCT | 60.147 | 20 | 235 | 37 | 271 |