Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN96668
TTCTTGTAAACACGGTAAAATACTTTTATTAATTTTTATTCTTTTATTGTACAAATTATTTCTGTATTGACATATATCTCTCTAGTATCCGTAA
TTTGTTGAAGCAATAAAATCAAGATCTTTTCTTTAGCTTTGTGCTTCCATTTGAGGTGAAATTTTTTCCATTTCTCTGTTCTTGCCAAGAACTT
CGTTTTGTCCGTACGATTGGTTCCTCTACTTCTTCTTCTTCTTGTTGTTCTTCAACTACTTCGTCTTTCATCATTGATTGTTGATAGTATTTGA
ATGCCACTAACAGCACAAACACTGCCCAAATACGAGCAACGACTGAGGAAAAATTCCAAACAAGGGTGAATATACCAAAAGCAACCGCTTTCTT
TTGAGAGCATGAATCCCAAGCATCCTTAAAGCGTTGAACCCAAAATGTACCATAACCACTTAGTTGAGAAGAATATGAGGAGCATATCTTAGGC
ACTGTAAAAACACCAAAAAAACCCAATTTGGCCATTTTCCAAATAGTTATAGAGCTGCCACTTCTTGCCAAAATAAAGAGCAGCACTGCTAACT
TCATTGTAGTAGCTGGATCACCTGAAAACAAAGCTTTGACTTTTAAAAGAAACTCATTGATGTAAGGTAAGAATAATTTCAATGCCCATATTGC
TTCATCTTCACCAACAACATAATCTTCATCATCTATTGTATCACCTTCTTCTACAACACTCCTGAGAATAAAGGACTTAAAAATGAATCTTGCA
GCAAGATAGATGAGACCCATGTAGGATATTACAGAAATGAAGCTAATATTAAGGTCTTGAGTATATGATGATGAGATAATAGTAAATGTCCCTA
AACCAAATATCAATGCTGACTTTGATGCATCATTCCACATTATCAAATCAATGAAACTTTGCAACTTGTTATGTGATCTGTGGACTCTTTGTGA
TGGTAATTCATTTGATCTTGAAATGACTCTAGGATGATTTACAACAGGATGAGGTTTTCCAAGTTGCCGTGGCAAGTTTGTTATGAATTAAGAT
TAGGCTCAGATATGTATATGTTGGTCAGGTCATAGAGGTCTCCGAGTTCTGTTATGGCTGCAAAGGAATCCGGTTGCAAAGCAGGTATATACGT
GTGATTTTCGCATAAAACATCTGATCCGTTCAATTATCAGTAGCATTAGAAAATAGCCAATTTGATCCTGAGCTTAGTCTGCTAGCCTCCTCTT
TATGAGATCCTGCATCAGTTAAAGAACGGGCCTCACTTTGGCAAAGCACCTTAGGATGAACATCATTCATGAGTGTCACCTAGTGAGCCTTTGG
TTTCTCGAGTTGTTTATTCTTTGCCACCACAATGTCAATCAATCATTTTGCTTGGTCGACAATTTTGGTTTATACCCCAGTGTCATGTTCTCCA
TCGTTGCAATCAAGTTGCCAAAACCCACACCCAGCTGCTGCAGCACCTTTATCATTTCAGTTTTTTCAGTTATTTCCGTTTTTTTAGAGCTAGC
TTCTTTTTTCCCATGTTTTGTGGCAGATGATGATGCAGTAGCATGTGTATCTTGTACTGTCTCCAACAAGATCATACGGGTATACTCACTTACA
ACACCAGTCTGCATGCTTAGTTTTGCCACCTTTTCCTCAAGCTTTTTATCTTGTGAAAACCATGCTTTTGTCGTGTATTGCTCAATTTGTTGCT
TCGCCAGGACCTTGTCAAGAGGTATGTCCTTTGGCCGCTGGACCTTCAGGTCAATGGTGAAGCTACTCATATCGGCACGGACCCCCCTTACTTT
CAGAGTTTCCGGAAAACCACCCTTGTACTGCCCAAATAGTATTAATGGCCCTTCCGAATATACATCTGGTACAACTGATGGATAAACCTCAAGA
GCATCAAGATCATCTAGACCATCAATTTCAATGTTGAGCACAACCGTTGAAGCAGCTCTGGAAAACAAAGCTTCCATTTGAACTACAACTGAAT
CTGCATCAGGCGCAGCATCAAAATGGCCCCTACCAATCATTGCAAGCATTCGCAAAAAGTATTGGTTGCAGAATGAACCTATACCAAACGTGCA
AATGCGTGGACAAAGCTCTGATCCTTGACTTCTTAGTTGCTTTTTCATAACTTCACAAATTTGTCTTTCATCTTCAATGGCCCCGTCGGTTATA
AAAAATATTATTGGAAGTGATTTCTTGCTCCCAGATAGCATCTCTATGGACTGATTAAGAGCAGCCGACATGTTGGTGCCACCACCAGCAATGA
AATTCATGCCAATCCAGTCGGTTGCTTTTTGAAGAGCTTCCTTTGTAGCCAACTCAAGAGTTGATGAATATAAGTAAGTTTGGTCATTAAACGA
GTCCCCTTGATCCAGCTTTGACATTGCTGCAACAACCGCACTTTTTGTAGCTTCAATTGTCCTCCCCTTCATGCTTCCACTTATATCAACAACA
AAAAGCACTTCCTTCCTGATCACCTTTTTGCTGAGATCAGGCCCTGGGAATAAGTACAAAGAAAACATCTCACTTTGGTCGATACTGAGTGACG
ATGGAGACTGCAAAATGACGCCACCAAATGCATTGCTTTGAGGAACCGCATATGTAAACACAAAATTAGTACTTGACCACGCAAGAACTTCCGC
TTCATACAAGAAAGCCAATTTCTCAACTACCCGCTTTTGCTCCTTCAAAGGATGACTCGCTGACCTAACCACAACCTCTGTGCCCAATCCAACA
TTGACGCTCAACTCTATCTTTTCCTTTTTCGATAGCTTCTTTCCAGCAGGAGTAACATACTCTGGGAAACTGAAAGGAATATTTAACGTGAATT
CACCGTCTTTATAAGATATTTTCTGTGACCATTTAACTTTGACTGAAAAATTTGAACCGCCATCAACCTGTGGTATAGTCAATGTAAATATATT
AGGCTTGAGAAATCCACCATCTTCGGGTTTGCCTACACTTTCCGTCTCCCCCTTTTCATCCATGACAACTAGCTGCGTCTTATACGACTTTCTG
ATAAGTTGAACCTCAACACCTAGAATTGAACCCTGTGGGCCCATAGGGACAGCAAGGCGGACATCACAAGCAGCACTCCCC

Primers for UN96668 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1TGTGCTTCCATTTGAGGTGA 60.2420AGTCGTTGCTCGTATTTGGG 60.13220193 134326
2TGTGCTTCCATTTGAGGTGA 60.2420GCTCGTATTTGGGCAGTGTT 60.1420186 134319
3TGTGCTTCCATTTGAGGTGA 60.2420GTTGCTCGTATTTGGGCAGT 60.1420189 134322