Simple sequence repeat (SSR)
| >UN05579 TGCCTCTATAAAAACTCAGATAATGACCCATAAGTTTATACATATTCAAGAATTGAATTACAACTTAAATAGAAGATGACAATATTCAATGGCA GACGAGCGAGTTGATAAAGAAGCACAAAAAACACGTAAAAACAGGAGACGAAGAAAAAGACTTGTATTCATCTCTAAGGAAATGAAACCGAGAC TACTTGGATGACCATCAAAAAAATCAGCAGCTTTGCATGGGAGCATGAATCGCTCTCGCGTCTACACCTTTCTTACCTGAATGTTATGGGTGGA TTGGAACCGCCAGATGGGTTGTCTGCCACTCTGAAGAAGAGCTACATGCTCGCCCTCCTTCAACATTCCTTGATTCTTCAACACAGTAAGAGCA TTAGCGAAGGTCGCTTCAGCGTCATCTGAGAACTTCATGTATATGGGGCAAACTCCTTGATACAAAGCCAATTTCTGCTGTACCCTTTTGTCAT CTGTGAAGGCAAATATGGTGCCATTGGGTCGATAATGGCTCAGTAAGACAGCCATGGTACTAGTTCTCGTGAATACCACAATTGAAGTTCCAAG AGTGTTGGACATTGATGTGGCATGGTATGCAAACATTTCGCTCATATGGTTCTTAAATGCTTGATTAAGACTTGATGCAGTGCCGCCACTCATT AAGCTTGATTCAGTTCTTAACGACACCGTGTGCATTACGTTAACAGCCTTTAATGGAAACTTTCCATGTGCAGTTTCTCCAGAAAGCATGACTG CATCAGCACCCTCTCTAACAGCAATAGCAATGTCAGATACCTCTGCTCGGGTAGGTGTAGGATGAACGATCATGCTTTCAAGCATATTTGTTGC AACAATAACAGCTTTTCCCATGCTACGGCATGTCCTGATTATCTCTTCCTGCAACAATGGAACCTCTTCAACAGGCAGCTCTGCACCAAGGTCC CCTCTTGCAACCATTGCCCCGTCAGACGCTGTGATAATTGACTGCAAATTCGGTATGGAGTCTGCACTCTCAATTTTGGGGATCACTTGAATAT CTGCACCATGACTTTTTAGATAATTCTTCAACTCATGGATAACTTCTGCATCTTTGACAAAAGAAACTGCATAGAAATCAACTTGATTGTCCAC ACCAAATTTGATATCATCCCAATCCTTTTCGGTAATAGATGGTAGAGTTGCACTTTTTCCTCGAACATTCAGATGGCGTCTAGACTTAAGTTCT CCGCCATCCACAACTTCACATTTTACTGAATCTTCGGTCTTGGACTTCACCAATAGTGACATCATACCACCGTCTACTAAAAGCATGTCACCCG CTTCCACATCATTCACAAAATCATCATAGTTAACACTAACACAATCTGCAGTGCCAACACCTCTTTTGATTGTGAAAGTGAATTCTTGGCCACT TTCCAAGTTAACTGGTTGAGGCAAGTCTCCGCTCCTGACCTCGGGACCCTTTGTGTCAAGCATGATTGCAATGACATTATCCTTAGATTGAGCA TTATATTCCTTAACAAGATCGATAACTTTCTGGTGAGAAGCATGGTCTCCATGGGACATGTTTAACCTTGCAACATTCATCCCAGCCTCAGCTA GCTTCCATATCATTTCCTTAGTGTCGGTGGATGGACCGATTGTACAAACAATTTTGGTCTTGCGCTTAACAATGGGCTTAGACCACATGGCTGA GCTGTCACCTTTTCGTAGAACTTCTTGTGGTTGATAACTCTTAGGGACATCTTCAGGTGTAACAGGAACAACTTCAGTAACAGCTCTCCTAGCT GTAACACTAAGACCACCACGGTTGTTGTTGTTGTTATGGTAGTTGGGTGTAACACGTGCAACAACCTGGTTAATATTAAGAGATCCATTGGTGT TAAGAAATGAATTGTTGAGCAGCTTTGTAGCAACAACCTGAGCCATTATTATTATTGGTTTTGTTGATGGAAAAAAATATGAAAACAAGTGATG AATATAAAAGAAGCTAGGGGGCGATGTTTTCTGAGGAGCTTTGTGTGTCTGT |
Primers for UN05579 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | GGCTGAGCTGTCACCTTTTC | 59.997 | 20 | TGCACGTGTTACACCCAACT | 60.072 | 20 | 160 | 1687 | 1846 |
| 2 | TAGACCACATGGCTGAGCTG | 60.008 | 20 | TGCACGTGTTACACCCAACT | 60.072 | 20 | 170 | 1677 | 1846 |
| 3 | AACATTCATCCCAGCCTCAG | 60.073 | 20 | TGCACGTGTTACACCCAACT | 60.072 | 20 | 271 | 1576 | 1846 |