Simple sequence repeat (SSR)
>UN95972 TGTCTGTTTTTGGTCCTAACAGGAAACCCATCATAGAAAAAGAAATGCATTCTACCCCCAATATTCGTTTTCTAATAGCAGCAACTCGGTCTTC GATAGGTATGGGACCAACAGTGAATTCGACTTCAGCGTGTTCTTTATTCTTGTACACTCTAGTGATCTGGTAAATCCATGGATTTATTTTCTGA TGTACTTCCTCGTAAATTGGCCCACGGAGAACTGTTATATTCTGCTCCTGAGAACCGATAGAATATGAACCATTTGGCCGGAAAATATATGCTC CAGATGCCTGCAACCCGGTAGTGCCATCAAATCCAGCGTAATAGAGATATGATTGGCTCACAGAGGCTTCAATAGAGCTTCGACTATTAACATA CTGAGAAAGCTTTCCTTCACTTTTAGAATAGATTAACTTCAAATTTCCAGTCCCTACTTCTACACCACCTTTTCCAATTCGAGTATGCTTGTAG AGTGCTTGTTTTACAAAATTTGAAGCTGGCTTTTTTGTGCTCTGAATGGTGTAAGTGCTAAAACCCAGAGGTGGAACAGATGCTGTAAATGCAA GCGTAAACTTAGGAGTTGAACTTGGTGATTTACCCGTGTATGCAGTGGCGTAGTAGTTTCTAAGGGCAATAGAGTCTTTGACTACAGGAAGAAG TTGAGATTCAACTTGTTTCCCACTGGAGTCATAGACTGCAATATTATCGCTCACAACTGGAAGTCTTATAACATCGGATCTCTTCCACCCCAAA GAATTGTAGACCACAACCACCAACTTTTTGCCAGACGATAGATCAGCTTCAGTTGGAGGGCAGTAGCTTATGTTCAGGAGCGGACACTGTTGAA AATGGGTTGCTGAACTTTCATGACCAGATTTCGATGATACCATGCCAGCTAATGACTCCGCAACCACCACTTCAGCCTCCTTGTGACTTATTGC AAGCCGTTTTGCATAATCATTAGCCACGTGCTGTTGTGAAGTACCACTAACGGCATCATGATGCTGAGCAATCCCTAATGCATCACCCAAAGAG TCTGTAGTGGGCCCTGCTTTGTTCCTTCCCTTCAATACTTCCAACTGTCTTGCTGCCAGATAATAGCCACTCAACATTCTCACATAGCCTTTGA GACCTGGCCTACTAGTAAAGTATCCTGTCCAGTAGGCATTTATGTCGCTTGCATATGGAAAATAGTCTTCTTCCTTGAGAGGCCATGAGTCGGT CTCGGCATATTTAGCATCGGTGTATATAGACGGCGTTGAATAGAGAGCATTGACACGACCATCTTTATTGACGTAATGAATTAACTTGTCCATA TTACGAAACCATGATTCGGCGTACTGATATTTGAAGTCTGTCCCCATTGTCCACATTACATGATTCGAGCGAGTAATGTTTGCCTGTGAGACGG CTGCAGCCACAAAATCATTAACCCGCTCTTGGACATTGTAGTCAAACAAGTTGACATCATCCTGCACTATTTTAGAATCATCGTTGACTTCAAA GTAAAAACCACTTGGAGGTTCATAATTTTCAGGAAAAGCACCTGCAAAAATCTGAGAAGATGAACCAAGACTCTTGGAAGCCCGCCAGATAACT TCGAGACGTTTATCACCTTTTCGTTTAGCTCTGTCTTGGTAATCAATTCGGCCAAAGAAAAGAGAATCAAATCCAACCTCAGCCCCCAATAGGT AAGCCTGCACTGCCGAATGACCAAAGGGATCTATTTGCCAACCAATTCTTGGCGTTACATTGAACTGTTGCTTGATAAATTTATGCCCATACGT TGTCTGATCAATCATATCAATATAATGTGGTGCTGCCTCGTCATGCATACACCAACCTCCATTTATCAACTCAAGTTGACCCGAGCTAACAAAA CCCTTGACTATATTTTTTGTTGCCTCACTCTGGTCCCTCCACCATCTCTGGAAAAACGCCTGTTCGACATAGACAAACTTGCGATTCTTATCGC GCAACAAAGCCGGAACCAAAGAATCAAGCACATTCTGAACACATGCTCCCTGAATAGAATTATTTGATCCAACATAGTACTGATCAACAGTTTT CAACCAACCAACATCATCATGAGTATGTGCAACCAAATGAACATTCAATTTATCCTTAACAACACCTGCTCCAGTTTCATATATCATATACTTA CTTTCCACACTTTTAACCACAACACTCAGTAGAAACAACAACAACAACACTCTAACATCCATCATTAACCCACAGTAAATAAAAACTAACTTGT CCTCAACACTAAGTGACAACTATATATATATCATTGTTTGACTATTGGGTTTGGTAAATGTGACAAAATGACGTCGTTTTAGTTGATGAGATGG AATCTTTTTTTTGTTATGGATAAAAAGGATCAAGAAATGAAAGTGGTTTTTTTTTAGTGTGAGTTCGAGTGTGTGTGAAGAAGAAGAGGACGAA TAGAAAGTA |
Primers for UN95972 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CAACACCTGCTCCAGTTTCA | 59.873 | 20 | TTGTCACATTTACCAAACCCAA | 60.124 | 22 | 195 | 2128 | 2322 |
2 | CAACACCTGCTCCAGTTTCA | 59.873 | 20 | TTTGTCACATTTACCAAACCCA | 60.124 | 22 | 196 | 2128 | 2323 |
3 | CAACACCTGCTCCAGTTTCA | 59.873 | 20 | TGTCACATTTACCAAACCCAA | 58.783 | 21 | 194 | 2128 | 2321 |