Simple sequence repeat (SSR)
>UN95069 TTTTGGAAAACAAGGAGTACTCATAAGTCATACCACAAACATAAAAATGAGTACACAAATCCTAGAAGTTTTATAAACTAGATACATATGATAC TTCAAACACATCTCTCAAATTAACAATGCAAACATGGCTTATTACATCAAAACACAAACACTAGTCACACAACCACGGAACCACCAAACATGAC CTTAAGAGGTAAGAATTGGTGGAAGATAATCAACTTTGGCACCAAGAACGCGAGCTTTTGTATCAGGGAAAAACTCAGTTCCGGGTAGTTCGGT AACATTACCTTCGCTAGCAACCCCAATAGGGTACCGAAGCAAGTGACCAGGAAGATCTTGTTCAAGGTTCTCACTAGCATACAAATCCCAGTAC CTGTCTGCGATTTGGTTAACTTTTTTCACACATTCTGTGGATTCAGGGTGTTGGAAGGTGTCATCAAGCATGCCAAGGTGTTCGTACCATAGAG CCATACGGAAACCATGGACTTGACCACGTGCTGGTTCACGGGTGGCTAGATGGTATGGTTGGTATGCTCCCATGGCTATTTCGGAGTCTCGAGC ACCGTCCATTGATCGTTGGTTAATGTTGGCGGATCCAACTATTATGTACTCGTCATCAACAATCATCATTTTGGCATGCACGTAGATCATGAAA CGTCGAGCCTCCTGAGCTTTCATATAATCCGAATCCGGTTCAGGCGTTTCAGAAGGTTCATACTCTCCATCCCTCTTCACCTCCCGATTCCCAA GGCAAAAGAAAGTAAGATAATCTCTAGGGTCTTCCACGCGACCCTGGGCTTTTAAAGCCTGAACAATATCTTTATACATCATCTCCATAGTCCT CCTTTGCCAGTCCAATATTGCCTGAACCGATGCACTTTCTGGGATCCCCTCGGGCCACATGGGGACCACAACATATACAGTAAACTTCTCACCA GCCTCGATCTTACTAACAATCTTTAAAGAAAGTTCTTTCGGGATGAGATGCAATGCACCGACATCTTCACCTTTCACATCATCAAAATCCCACG CGTAAGAGCTTCCCAAGAAATACTGGTTTTCGATATAGATGAAATTTTTTGCTCTTCTTATAGCGTGAATATATGCATCCTGAATACTGCGGTC TATTATGTTATCTTTTCCACTTACGAGACCTGCCTTAGCTGCTTCTTCGGGTGTGTCGGGAAACCCGAAAGCTGCACCACCATCGATGGATCTG AACACCTGAACATTCCATGTTTCTGGGTCATCGGGAAACATAACAGGAGAAGGTGGGACCATGATGTCATCAAGTTCTCTAAAGTTAACAAGAA TATCCTTCCCACCTTGTTTTTTCCACCTTTGTTCGAAATTAAACAAAACATCCCAAGCAACTGGTCCTTCGAGTCGACTATGTATATCATGCCA GGGTTCCCTAGGTCCACCTTTAGCTATCGAAGCACCAGTGTAGTTAGGCTGGTGGAAATCGTCGTGGTGAGCAGTATCAAGTGTTCTGAAAAGA GAATGAAATGGGGAATCGTATCTCCCGTCACAAAGATCAATCCCGCCAACAAAACTTACAACTCGTCGGTTCTGTGACCCCCCACTCGGCATTT CCGAGTCAACTACCACAATTTTCTGGTGATGAGTGAACATTGTGGAAATTTGAAGGTCTTGAATGAAACTTCCACCGTCATCAGGGTTACGGGG GCATAAAATACAGTTCACTTTGGAACCTTGAAAAAAGTTTTCAGTTTCTTCATCATGGGTAGCCATTAATCCATCCCGTTTTAGTAGATCTACA GACGTTCGGTCATCCCATATGAGCATTAGAACTTTAACACCTTCACTAGCTTTGTTTTTAAGCAGATCACCGAGCATGACATCACCTCCTGGCT TTGGCCTTCTCGAATCTCGGATCAAAGATATCTGTGTGTAAACCGACCATCCCGTGATATAAATAAAGTGTTTCGCATTAGTAATAGCATCGAA TATATCTTCCCAACATCTGTGGGGTTCATAATACTTCCCACCGGCTAAAGGTATCTTCGGAATGAAATCGTCGGGTACGTGAGCATCTTGATAC AGAGAGACCCGACATCCTTGTCTTTGTGCAAAGAACGTGTATGGAACACCAGGATACTTGCCACTTTTAATTCCATGGGCCCAGTTACGATCTC GAGTAACATCAAAATACTGTAACTTAACATGGATTTTGGAGCCAGCACTTATGGGATTTTTGTCTGTATCTAAAATCTCGACCCATCTATCTAT TTCGTCACCGTTTAGGAGTTCTTCAACAGGAACATAAGCTCGTCCAATTAAAGTTGCACCAATAGGGTTATCATCTTTGACAGTGAATATGACA TTAGAGGCTGCGTGAGCACAGTAAATATGGAAAGACTCGTTCCACTCCGGGTTTTCAGGTTTATCTTCGATTTTCCTAGTTCGGCCAACTCTGG CTTTCTCTAGATCGATAGTTGCGTAAATTTTGGGAGTCCCTTTACCAAATCCAACAGTTTCCTCAATGTTACCGATAATCTTCTTGAAGATGTT GCGGCCACCACCATGAACTTGAAGCTTATCGACTTCATAGATCGTCACGTGAAGAGTACCATGGAGCAGTATCTGAGCCATTATCTATCCTGAT GACGTCACTAAACGGTTAATCTGAAGTGATTTTGTAACTTAACAAGAGCTAAATCCGATCATAAACATGTGATAATTGAGTGAACAATTTTGTG AGTGAGATGAGATATTTTTTGTATTATTATGAAGAAGGAGAAGATAGGGTCCGGAAATGTAGTGATAGTACTGTAATAATAATAATAATTGGAG AGAATTGATGAGAAGTTGTAGGTGAAAGTGAAAGTG |
Primers for UN95069 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TGGAGCAGTATCTGAGCCATT | 59.851 | 21 | CACTTTCACCTACAACTTCTCATCA | 59.74 | 25 | 251 | 2600 | 2850 |
2 | TGGAGCAGTATCTGAGCCATT | 59.851 | 21 | TTTCACTTTCACCTACAACTTCTCA | 59.394 | 25 | 254 | 2600 | 2853 |
3 | CCTGATGACGTCACTAAACGG | 60.556 | 21 | CACTTTCACCTACAACTTCTCATCA | 59.74 | 25 | 224 | 2627 | 2850 |