Simple sequence repeat (SSR)
>UN95068 GGGGTTTACCTCGCCCAATAGGCAACTTGGTAATTAAGCTCAACTGATGCCAGAAAGTAGTTTAAACCCAAAACTAGAAAAGCAAAAGAAAAAC AAGCTGTATTGTTCATTAGGACACAGTACAAATCTTACATAATAGCACACCTATGCAAACACAGCTCCTATTCCGTATGAAAGAAAAAACCCTT TAGAAATGAATCGTTTATTGTTCAATCACGACTGCCAGTAACAAAACCAAACAAGATTAATTTATTCAAACCTTATAGAAAAAGCAGAATACCT TATTAAGTAGTTAATATCGAAGGAAGGTAATCTGATTTTCCTCCAAGAACACGTGCTTGTGTATCAGGGAAAAACTCGGTTCCAGGCAGTTCAG TCACAGTTCCTTCACCAGAAACACCAATGGGGTAACGAAGCAAGTGACCAGGCAGATCGTTTTCAAGACTTTCATTAGCAAACAGATCCCAGTA TTTGTCGGCTATCTGGTTCACCTTCTTCACGCATTCAGTGCTCTCGGGGTGTTGGAAACTGTCATCAAGCATGCCAAGATGTTCATACCATAGA GCCATACGGAAACCATGGACTTGACCACGTGCTGGTTCACGGGTGGCTAGATGGTATGGTTGGTATGCTCCCATGGCTATTTCGGAGTCTCGAG CACCGTCCATTGATCGTTGGTTAATGTTGGCGGATCCAACTATTATGTACTCGTCATCAACAATCATCATTTTGGCATGCACGTAGATCATGAA ACGTCGAGCCTCCTGAGCTTTCATATAATCCGAATCCGGTTCAGGCGTTTCAGAAGGTTCATACTCTCCATCCCTCTTCACCTCCCGATTCCCA AGGCAAAAGAAAGTAAGATAATCTCTAGGGTCTTCCACGCGACCCTGGGCTTTTAAAGCCTGAACAATATCTTTATACATCATCTCCATAGTCC TCCTTTGCCAGTCCAATATTGCCTGAACCGATGCACTTTCTGGGATCCCCTCGGGCCACATGGGGACCACAACATATACAGTAAACTTCTCACC AGCCTCGATCTTACTAACAATCTTTAAAGAAAGTTCTTTCGGGATGAGATGCAATGCACCGACATCTTCACCTTTCACATCATCAAAATCCCAC GCGTAAGAGCTTCCCAAGAAATACTGGTTTTCGATATAGATGAAATTTTTTGCTCTTCTTATAGCGTGAATATATGCATCCTGAATACTGCGGT CTATTATGTTATCTTTTCCACTTACGAGACCTGCCTTAGCTGCTTCTTCGGGTGTGTCGGGAAACCCGAAAGCTGCACCACCATCGATGGATCT GAACACCTGAACATTCCATGTTTCTGGGTCATCGGGAAACATAACAGGAGAAGGTGGGACCATGATGTCATCAAGTTCTCTAAAGTTAACAAGA ATATCCTTCCCACCTTGTTTTTTCCACCTTTGTTCGAAATTAAACAAAACATCCCAAGCAACTGGTCCTTCGAGTCGACTATGTATATCATGCC AGGGTTCCCTAGGTCCACCTTTAGCTATCGAAGCACCAGTGTAGTTAGGCTGGTGGAAATCGTCGTGGTGAGCAGTATCAAGTGTTCTGAAAAG AGAATGAAATGGGGAATCGTATCTCCCGTCACAAAGATCAATCCCGCCAACAAAACTTACAACTCGTCGGTTCTGTGACCCCCCACTCGGCATT TCCGAGTCAACTACCACAATTTTCTGGTGATGAGTGAACATTGTGGAAATTTGAAGGTCTTGAATGAAACTTCCACCGTCATCAGGGTTACGGG GGCATAAAATACAGTTCACTTTGGAACCTTGAAAAAAGTTTTCAGTTTCTTCATCATGGGTAGCCATTAATCCATCCCGTTTTAGTAGATCTAC AGACGTTCGGTCATCCCATATGAGCATTAGAACTTTAACACCTTCACTAGCTTTGTTTTTAAGCAGATCACCGAGCATGACATCACCTCCTGGC TTTGGCCTTCTCGAATCTCGGATCAAAGATATCTGTGTGTAAACCGACCATCCCGTGATATAAATAAAGTGTTTCGCATTAGTAATAGCATCGA ATATATCTTCCCAACATCTGTGGGGTTCATAATACTTCCCACCGGCTAAAGGTATCTTCGGAATGAAATCGTCGGGTACGTGAGCATCTTGATA CAGAGAGACCCGACATCCTTGTCTTTGTGCAAAGAACGTGTATGGAACACCAGGATACTTGCCACTTTTAATTCCATGGGCCCAGTTACGATCT CGAGTAACATCAAAATACTGTAACTTAACATGGATTTTGGAGCCAGCACTTATGGGATTTTTGTCTGTATCTAAAATCTCGACCCATCTATCTA TTTCGTCACCGTTTAGGAGTTCTTCAACAGGAACATAAGCTCGTCCAATTAAAGTTGCACCAATAGGGTTATCATCTTTGACAGTGAATATGAC ATTAGAGGCTGCGTGAGCACAGTAAATATGGAAAGACTCGTTCCACTCCGGGTTTTCAGGTTTATCTTCGATTTTCCTAGTTCGGCCAACTCTG GCTTTCTCTAGATCGATAGTTGCGTAAATTTTGGGAGTCCCTTTACCAAATCCAACAGTTTCCTCAATGTTACCGATAATCTTCTTGAAGATGT TGCGGCCACCACCATGAACTTGAAGCTTATCGACTTCATAGATCGTCACGTGAAGAGTACCATGGAGCAGTATCTGAGCCATTATCTATCCTGA TGACGTCACTAAACGGTTAATCTGAAGTGATTTTGTAACTTAACAAGAGCTAAATCCGATCATAAACATGTGATAATTGAGTGAACAATTTTGT GAGTGAGATGAGATATTTTTTGTATTATTATGAAGAAGGAGAAGATAGGGTCCGGAAATGTAGTGATAGTACTGTAATAATAATAATAATTGGA GAGAATTGATGAGAAGTTGTAGGTGAAAGTGAAAGTG |
Primers for UN95068 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TGGAGCAGTATCTGAGCCATT | 59.851 | 21 | CACTTTCACCTACAACTTCTCATCA | 59.74 | 25 | 251 | 2695 | 2945 |
2 | TGGAGCAGTATCTGAGCCATT | 59.851 | 21 | TTTCACTTTCACCTACAACTTCTCA | 59.394 | 25 | 254 | 2695 | 2948 |
3 | CCTGATGACGTCACTAAACGG | 60.556 | 21 | CACTTTCACCTACAACTTCTCATCA | 59.74 | 25 | 224 | 2722 | 2945 |