Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN94437
AAGAATACTGAATGATGAAGCTTTTTCTTTATTTAGGGATGGTGATTAGATCATTCCTCTTCATCACCCAATAATGCAAACGAGAAAGGTGCAA
ACTTGTACCCGTCTCCTTCATAAAACTTGTTTTGGAATTCTACCCAATGAAGCCTTAGTGCATGTAGGAAGGCACTAAGTGTTTCCATTACTAG
CAACACTCCAACAGTTGCAAATACGAACACGATTATGCCCACAATAAGGATAATGATGTTATTATACCCCCAAGCAAGAAGAAGAACCTTCTCA
TAAAACACGGTTGACAACTCCGAATGTGCCAAGCTGAGTGCCCATAAACGAAGGTATGAAGCTGTATTTGATACTGCCCCAAGTACAAACTCTA
TTGTATGGATGAGTTGATGAACAAATACTTCACTGAACTCAAATTCCTCATGACCGTGAGAATCATGAGCTGCCTCCACCTGCAAGGATTCATC
TTCGCCCTCAAGGGGTGTGTAAGACTGACCTTGGTGTGTCCTGTTATGTTGTGCCTTCAAAATGAAAGGCTTGGGTAGTAGCATCCATGGGACA
GCAATTAGAGAGAGCAATAGAAGCACAAGCTGAACAGTCTTCTGGTGTGGAAAAAGCTGGTTGTCACCGAGATCATCAGTGGGGCTAAGGAACA
TGTATATCATCACATGGTATAGATCAGCTTGTGAACCCGTGACCCACTTCAGAATGATAAGGAGGGAAAGGTATCCAAACAGACCATTCAAAAA
GATCATCTGTGGAATAAATTGGAACCAAACATTCACAGGATTCTTGAAGTACAGAGCATTGAAAAAGCTCAGTATTATTCCAAGGTTCATTTGT
GCTACTCCAATAAGAATCGACATTTTCATCTTCAAAGAGTTAAGGAAGGGCAATTCACTGCGACTCCCATGCCACGCAGGGTCCACACCAAATG
GGTATGTATCACGCGCCTTTATCAACCCTATAGTGGTTGCCTCACTGCATCCAGCATCACGGCAGACATATGCTGAAGGACTAAATAACTCGAA
TGGAACCGAGAAGAACTCATTGTAGATCAAACCAGTATAGATTGAGAAAAGGGACATCAACAATATAACATATCGACCCCCAAAGGTCATTTCC
ATTATGTCTCCAAGCTTCTGATTAGCGTATTTCTTCTCCCTGGATATCAAAAATATAGTTGCCAGCAGGATGCATATACCGTGGCCCCAATCAC
CAAACATGACAGCAAACAGAAATGGGAATGTGACGATAGTATATACACCAGGATTTGCTTCTTGGTACTTGGCAACCCCATATGCATCAACGAT
TGTTTGAAAGGAATCAGTAAACTTGTTTGTCCGGAAATACGTTGGAGGCAACTCTTTAGTGTTCAAAACCTGGAATATAGCACCAACTTGTGAG
TTTGAGTCTCTTGTTGCCCGCTCCAGTGCATCTTGAATCTGTTCTGTCGCGTAAACGGGACTCCACCCTTCAGCCACAAGACACTTCTTTGTCA
CATCGATGCTGAGCATATTCAGAGTGTGATAAATAGACTTCTCTTTACGAACCAGAAGGTTCCACCGCTCATATTTTTCTCCTATTATTTGTAG
CAAATTGCCACGGTGCAGAAGGCCAGCATCTATTGTTGTCTTTAGCTCAGATGTCCTTCCAGATACCTCAGTTATCGTTTGTTCTTGTTTGCTA
AGTTCCTCTGCAAAAGGGTAACGATTTGCTCCAAAAGCTTCGCATATCTTTAGAATTTTGCTCTTGGCTCTTTCTCCGGAAAAGAAAACCACAA
AAACATTTTTCTCAACCTTTTCTCCTGAAGTAGGATCAATAACAGCTTCATCCACAGACGACTGCCTCAGAAAGACATTTCCTCTTGTAGCACG
GAATAAAATCCTTTCAAAAGCCAAGGCTCTGCCTTTGGGCACAAGGCCAGTGAGAAACCCCAACTTGACTTGTTTGCTTTGGTCAGTTATATCC
TGATCCTTCAATAGAGGAGTTTCCAAAGATTCTTCAGCGGCCTGCTGTGATGAAGCTTCGCTGTGCTGAGCTGCAGCAATGCTTTGTGCCGCTT
TGAAAAACTCTCCGGCCTTTTGCAGAACAAGCTTGTATTCTACAAGCTCATTATAGCCACGCTGCAACTTGTCACTATTTGCATTGATTTCAGT
TAGCTCGGCTTCAAGATCTCCAAGAGTTACCTCAACATCATCCAGATTAAAGTCAGCTTTGGCATCAGCCTTCGCTGATGGTTTGACACCCGCC
TTTGACATTTGATCTTTAAAGAAGCGCAACTTACGTGCCAGTTCCGCGCATCTTTTAATCTGTCCTGCATATGTTCGCTGGAAAGGGCTTTTAT
CTGCATTCAGATCTTTGAATTGAACGAGACCAATGTCACCGAGATAAGAAGCGGTGAAATGAGCAGACTCGATAGGAATAATGATTTGAACTAA
ATGCATCGCTTCTGAGCGGAATAGATCCATGGAAGGACAGCATCCTTGCTGTTGCTGCTCACCCGCCATCTCTCCTCGGTTCAATCAGTGTGTG
TGTGTGT
CTTTGTGTCAGATACTAGACTCTTCTTATCCCTGTTTTTTTTTGG

Primers for UN94437 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1ATCCATGGAAGGACAGCATC 59.89320CAGGGATAAGAAGAGTCTAGTATCTGA 57.91327111 24692579
2GATCCATGGAAGGACAGCAT 59.89320CAGGGATAAGAAGAGTCTAGTATCTGA 57.91327112 24682579
3GTCACCGAGATAAGAAGCGG 59.83620CAGGGATAAGAAGAGTCTAGTATCTGA 57.91327195 23852579