Simple sequence repeat (SSR)
>UN94192 CTACATACTAGAAAATATTCATACATCTAAACGAGGTGGAAGCAAACGGATGGTATCTATCTATCTATCTATCTCTTTGATGATATGCGGTCAT TAGTTTTATACATGAAGCTAAAATCTACATAAACAAAAGAAGAAAAAAAAGAAAAAAAGAATCGAGTCAGCAGCCTGGCACAGGTAAACTATAT CTGTACATCCAACAGCCTGTAATATCAAAAGAAGCATCACATCACCACCACTACACATACAAATTGAGCACCGATCTTCCCAGTTTATGCTACA CACCATATTTGCTTTCCCGTTTATTGGTGTCATGTCATCTTCTTCATTGCCATTAGTAATCTAAAGCTATTTGCTTTCATCCGCTTTCCTAACT TGAGCAAGAGGCATGTCATCAGATAATTCTGCTTCATCTTCTGTGTCTGGATCCGTTTGCTGGCTCTCAGCTTCATCTTCAATAGACTTTTCAC TTGATGAGCTTGAAGACTGCTTCTCTTCTTCTTGACCAGATCCTGACTCATTGTCGGTTTCTTTCTGCCCAGAATCAGGTTCGATTTCATTGGA TGACTCGGGATCACTGAAACTATTCTCTGCGTGTTTAGCTTGCTTTTCCTCATCTGACTCCTGTTCTCTGTCACTCATCTCTTCGTCTGTGTCC AAATTTTCAACTTTGGAAAAAGTCAAAGTATCATGCTGAAATTCATTCTCAGGTTCACTCATATTATCGGAGTCTTCTTTTCTTTCTAATTCCA AATATTTAAGATTTTTCCTTCTTCGCCTCGTACTTTTTCTTGGGGTTCCTTTGCCTCTTACCATAGATGATGGAGATATGTTACTTGACTCCTT GTTTTTCTTTGAATTATCCGAGACTTTGATTTTCTTATTAGAGAGCCCTTTCTTAGGAAGTTGGCTTTTGGAGGATCTAATTCGCTTTTTAGGC TTCGGAGTGTTGGCAATAAGCTCCCATCTTTCCTTATCCAATCGTACCACTTCAACGTCGCCGTCATTGTATAAAACCACATGTTTTTTCTTTT GATGATCATAAGACTTCACTAATCCTTCATAAAACGCCTTATCCATAGGCCACCAAACTCTTATTCGTCTGCCAATCAAGTCTGTGGTGTGATT TTCCCTTTCCTTTGAAGTGCACTTTACTAATCCAGAAACACGCCTCCGCTTTCGCTTCTTCACAGGTCCTGACTTTTGGTTAGGCTTCGGCAAA TCAATGTCAACAGTATTCTCATGTTCTTCTGTTTCTGTATGCCCTCTAACGTCCAAATCAGTGGTTTCCAAAGAAGGTTTATCTTCAGAAATAC TCATTTTAATGCTATCAAAAGCTGACAACTCCCTTGACTTCTGACGTTTGGGTACAGAGGCAGTAATTGATTTGGTAGGTATTCTTTTCTTCTT ACGCTTTTCATCAGTTCTAGTTTCTTCATGACCGTTGATGATTGTCGACGCCACTGAATTATCCAAATCTATTTCTCTCACCATCCCCAAGATA TCATAGTTGTTATTATCATCACCATTAATAGCATTATTCTTATCACTATTCATCTGTGTAGTACTTGGTGTGGTTACATTTTTCACAGCCTTTC TCTGCTTTGTTCCCTTAGCTTTTAGCCATTTCAACACTTTTCCTAAAGGCACCTCAGCACCATCTGTTTCAAGGTCTATCATCATATCATCCTC AGCAGATTTTGACGCATCACTGTCATCAACTTCCAAATTAAGCGTCTCGAAGTGAGCAAGAGCAGTAGCTTCAGCCAGCCATGTCTGCCCTACA GTGACATGTTTCTCATCTTCTCCTTTATTATTTTCTTCTTTATCCTTTTCATCTTTCATGTCTTCTTCTTTCTCTTTTTCTTCCTTTATGTCTT TTTCTGCCTCCTTTTCTTCTTTCTTGTCACCGTCTTTTTTTGCTTCCTTTTCTTCTTTCTTGTCACGGGGTTTGTACAACCCTTGAGGTAGAGG GACGTGTACTGCCAATTCCTGAAGATCTTCTTGCTTTTGTGCTAACCGCTTGGTGCTTGAGAAGCAAAGGTCGCAGATTGCATATGATTTCTTT GAAATGGTTGTATCCACAGCATCTTCAGCGCTCCTGATGCTTTGCAGAACAGAAAGTACTGAAATAACCCCTTCTTTCTTTAGATATTTTCCAG GATTTCCCGCTTCATCTTCATATGCCAACATAGAAAGATATACATACAATTTCCTGTATATGGGTTCATAAGCTTTGACATCCTTGCATTCATC AATATCTGGACATGAAGGATCATGGGCAAGTGCATGAATCAAATATGGAAGAATGTATTCCTGATGAACCACCGAGGAGTTTCCATCACTTTGC ACTGAAATGTGTCTTGCCTTTCCTTGCTGACACATTTGAATGATGTCATTCAGATTACGGTGCTCCTCAGATTTCTTTTCTTGAACTGATTGCA GGGATCCTAAACCTAATAAGAAAGCACAAGCATATTTTGGGTCCAAACTCCGGTCCTTAATGTATTGATGAACTTTCTTGAGAAATAGCTTCTT AACTTCAGGGAATCCAGCCTGTGAAGTTCTCAAGGTGAGGTAGAATACATCAACAGGGATATTCTTATCCCAATGCTTTGAAAGACGAAGAATA GCCTTGGCTGAAGCTAGCTTTAAATGCGCCTTATCAACAGAACTCGACTCGATATCTTTTGAGATTTCCCCAAAAGAAAGTATGTTATGGAGAT CTTTTATCAGTTCACCAATCCCAACACGAAGATGTGCATCTTTCACAGGCAAATAGCTCTTTACAAGAGTTTTAATGCCATATATCTTCGATAA ACAAAGTTCGCTTCTGTCATCCCATGATTCTTTTGTTTTGTCACTTGTTGTCTCACTGCACCCCAAGATATCTGTTTTAATGAAGCCATGAATT TTGGTCTCTTGCGTCTCAAAAACTGGCATGGCAGTTTGTGCAATGCAACCAAGAGACTGTAGCACAGATGGCAAATGTGTCTTTTTCTCTAGCA TATCAACAAGTTTCTTGTATAAAACAGAGAGTGACTTGAGCCCATCATCCTTTGTAATAGCTGCTAACGCATGTACAGCATACTTGGCCTGCCT CCTACTACCTTCTAAGCATATTCTCTCCAGTATTAAATCTAATGTGCTTGTTGATTCTCCCAAGTGTTCTCGAATCATTCCACCAGCTTTTGCT AAAACATGCAACACACCTTCCTTTATTACTTCATTTTCATCTTCAAGAAGATGGACCAAATCTTTTTCGGT |
Primers for UN94192 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GAGGTGGAAGCAAACGGAT | 60.065 | 19 | CCAATAAACGGGAAAGCAAA | 59.937 | 20 | 277 | 33 | 309 |
2 | GAGGTGGAAGCAAACGGAT | 60.065 | 19 | TAAACTGGGAAGATCGGTGC | 60.074 | 20 | 243 | 33 | 275 |
3 | TCTAAACGAGGTGGAAGCAAA | 59.869 | 21 | TAAACTGGGAAGATCGGTGC | 60.074 | 20 | 250 | 26 | 275 |