Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN94192
CTACATACTAGAAAATATTCATACATCTAAACGAGGTGGAAGCAAACGGATGGTATCTATCTATCTATCTATCTCTTTGATGATATGCGGTCAT
TAGTTTTATACATGAAGCTAAAATCTACATAAACAAAAGAAGAAAAAAAAGAAAAAAAGAATCGAGTCAGCAGCCTGGCACAGGTAAACTATAT
CTGTACATCCAACAGCCTGTAATATCAAAAGAAGCATCACATCACCACCACTACACATACAAATTGAGCACCGATCTTCCCAGTTTATGCTACA
CACCATATTTGCTTTCCCGTTTATTGGTGTCATGTCATCTTCTTCATTGCCATTAGTAATCTAAAGCTATTTGCTTTCATCCGCTTTCCTAACT
TGAGCAAGAGGCATGTCATCAGATAATTCTGCTTCATCTTCTGTGTCTGGATCCGTTTGCTGGCTCTCAGCTTCATCTTCAATAGACTTTTCAC
TTGATGAGCTTGAAGACTGCTTCTCTTCTTCTTGACCAGATCCTGACTCATTGTCGGTTTCTTTCTGCCCAGAATCAGGTTCGATTTCATTGGA
TGACTCGGGATCACTGAAACTATTCTCTGCGTGTTTAGCTTGCTTTTCCTCATCTGACTCCTGTTCTCTGTCACTCATCTCTTCGTCTGTGTCC
AAATTTTCAACTTTGGAAAAAGTCAAAGTATCATGCTGAAATTCATTCTCAGGTTCACTCATATTATCGGAGTCTTCTTTTCTTTCTAATTCCA
AATATTTAAGATTTTTCCTTCTTCGCCTCGTACTTTTTCTTGGGGTTCCTTTGCCTCTTACCATAGATGATGGAGATATGTTACTTGACTCCTT
GTTTTTCTTTGAATTATCCGAGACTTTGATTTTCTTATTAGAGAGCCCTTTCTTAGGAAGTTGGCTTTTGGAGGATCTAATTCGCTTTTTAGGC
TTCGGAGTGTTGGCAATAAGCTCCCATCTTTCCTTATCCAATCGTACCACTTCAACGTCGCCGTCATTGTATAAAACCACATGTTTTTTCTTTT
GATGATCATAAGACTTCACTAATCCTTCATAAAACGCCTTATCCATAGGCCACCAAACTCTTATTCGTCTGCCAATCAAGTCTGTGGTGTGATT
TTCCCTTTCCTTTGAAGTGCACTTTACTAATCCAGAAACACGCCTCCGCTTTCGCTTCTTCACAGGTCCTGACTTTTGGTTAGGCTTCGGCAAA
TCAATGTCAACAGTATTCTCATGTTCTTCTGTTTCTGTATGCCCTCTAACGTCCAAATCAGTGGTTTCCAAAGAAGGTTTATCTTCAGAAATAC
TCATTTTAATGCTATCAAAAGCTGACAACTCCCTTGACTTCTGACGTTTGGGTACAGAGGCAGTAATTGATTTGGTAGGTATTCTTTTCTTCTT
ACGCTTTTCATCAGTTCTAGTTTCTTCATGACCGTTGATGATTGTCGACGCCACTGAATTATCCAAATCTATTTCTCTCACCATCCCCAAGATA
TCATAGTTGTTATTATCATCACCATTAATAGCATTATTCTTATCACTATTCATCTGTGTAGTACTTGGTGTGGTTACATTTTTCACAGCCTTTC
TCTGCTTTGTTCCCTTAGCTTTTAGCCATTTCAACACTTTTCCTAAAGGCACCTCAGCACCATCTGTTTCAAGGTCTATCATCATATCATCCTC
AGCAGATTTTGACGCATCACTGTCATCAACTTCCAAATTAAGCGTCTCGAAGTGAGCAAGAGCAGTAGCTTCAGCCAGCCATGTCTGCCCTACA
GTGACATGTTTCTCATCTTCTCCTTTATTATTTTCTTCTTTATCCTTTTCATCTTTCATGTCTTCTTCTTTCTCTTTTTCTTCCTTTATGTCTT
TTTCTGCCTCCTTTTCTTCTTTCTTGTCACCGTCTTTTTTTGCTTCCTTTTCTTCTTTCTTGTCACGGGGTTTGTACAACCCTTGAGGTAGAGG
GACGTGTACTGCCAATTCCTGAAGATCTTCTTGCTTTTGTGCTAACCGCTTGGTGCTTGAGAAGCAAAGGTCGCAGATTGCATATGATTTCTTT
GAAATGGTTGTATCCACAGCATCTTCAGCGCTCCTGATGCTTTGCAGAACAGAAAGTACTGAAATAACCCCTTCTTTCTTTAGATATTTTCCAG
GATTTCCCGCTTCATCTTCATATGCCAACATAGAAAGATATACATACAATTTCCTGTATATGGGTTCATAAGCTTTGACATCCTTGCATTCATC
AATATCTGGACATGAAGGATCATGGGCAAGTGCATGAATCAAATATGGAAGAATGTATTCCTGATGAACCACCGAGGAGTTTCCATCACTTTGC
ACTGAAATGTGTCTTGCCTTTCCTTGCTGACACATTTGAATGATGTCATTCAGATTACGGTGCTCCTCAGATTTCTTTTCTTGAACTGATTGCA
GGGATCCTAAACCTAATAAGAAAGCACAAGCATATTTTGGGTCCAAACTCCGGTCCTTAATGTATTGATGAACTTTCTTGAGAAATAGCTTCTT
AACTTCAGGGAATCCAGCCTGTGAAGTTCTCAAGGTGAGGTAGAATACATCAACAGGGATATTCTTATCCCAATGCTTTGAAAGACGAAGAATA
GCCTTGGCTGAAGCTAGCTTTAAATGCGCCTTATCAACAGAACTCGACTCGATATCTTTTGAGATTTCCCCAAAAGAAAGTATGTTATGGAGAT
CTTTTATCAGTTCACCAATCCCAACACGAAGATGTGCATCTTTCACAGGCAAATAGCTCTTTACAAGAGTTTTAATGCCATATATCTTCGATAA
ACAAAGTTCGCTTCTGTCATCCCATGATTCTTTTGTTTTGTCACTTGTTGTCTCACTGCACCCCAAGATATCTGTTTTAATGAAGCCATGAATT
TTGGTCTCTTGCGTCTCAAAAACTGGCATGGCAGTTTGTGCAATGCAACCAAGAGACTGTAGCACAGATGGCAAATGTGTCTTTTTCTCTAGCA
TATCAACAAGTTTCTTGTATAAAACAGAGAGTGACTTGAGCCCATCATCCTTTGTAATAGCTGCTAACGCATGTACAGCATACTTGGCCTGCCT
CCTACTACCTTCTAAGCATATTCTCTCCAGTATTAAATCTAATGTGCTTGTTGATTCTCCCAAGTGTTCTCGAATCATTCCACCAGCTTTTGCT
AAAACATGCAACACACCTTCCTTTATTACTTCATTTTCATCTTCAAGAAGATGGACCAAATCTTTTTCGGT

Primers for UN94192 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1GAGGTGGAAGCAAACGGAT 60.06519CCAATAAACGGGAAAGCAAA 59.93720277 33309
2GAGGTGGAAGCAAACGGAT 60.06519TAAACTGGGAAGATCGGTGC 60.07420243 33275
3TCTAAACGAGGTGGAAGCAAA 59.86921TAAACTGGGAAGATCGGTGC 60.07420250 26275